KEGG   Variovorax paradoxus B4: VAPA_1c50340
Entry
VAPA_1c50340      CDS       T02835                                 
Name
(GenBank) putative DNA ligase
Organism
vpd  Variovorax paradoxus B4
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-ProteinID: AGU52088
UniProt: T1XHT1
LinkDB
Position
1:complement(5308728..5310383)
AA seq 551 aa
MKDFAALYRELDASTSSLAKQAALQRYLREADPADAAWAVYFLAGGKPRQLVPTKLLRLL
AQEAAGLPEWLFDESYEVVGDLAETIALLLPPPTEAHDLGLARWVEEHLLPLREAGKAAP
DELPARLRAQWRQLAAEERLVYFKLITGAFRVGVSKLQVTQALAGVGGIDPKRVAQRLMG
YTHIGGRPRAEDYRALIAPESGAEQVQKTSGQPYPFFLAHAFNLPLEQFDAVLGPPAGWI
VEWKWDGIRAQLVKRAGVAWLWSRGEELVTERFPELAVLGDALPDGTVLDGEIAVWRDDR
VQPFAELQRRIGRKTLGAKLLREIPVVLLAYDVLEWEGRDLRALPQSQRRLLLDELVTRM
PHPSLLPSPMLTGIEWSDFARQREAARSMGVEGMMLKRRDAQYGVGRTKDVGVWWKWKID
PLSIDAVLVYAQRGHGRRASLYSDYTFAVWDGPPEQEGRKLVPFAKAYSGLTDAEMARVD
AIIRKTTVESFGPVKSVKPTLVFELGFEGIARSARHKSGIAVRFPRMLRWREDKPVAEAD
TLQTLAALLPS
NT seq 1656 nt   +upstreamnt  +downstreamnt
atgaaggatttcgcggcgctctaccgcgagctcgacgcgagcacctcgagccttgccaag
caggccgcgctgcagcgctacctgcgcgaggccgatccggccgatgcggcgtgggccgtg
tacttcctggccggcggcaagccgcgccagctcgtgcccaccaagctgctgcggctgctc
gcgcaggaagcggcgggcctgcccgaatggctgttcgacgagagctacgaggtggtcggc
gacctggccgaaaccatcgcgctgctgctgccgccgcccaccgaggcgcacgacctcggc
ctggcgcgctgggtcgaggagcacctgctgccgctgcgggaggccggcaaggcggcgccc
gacgaactgcccgcgcggctgcgcgcgcagtggcgccagctcgcggccgaagagcggctg
gtgtacttcaagctcatcaccggcgccttccgcgtgggcgtgtcgaagctgcaggtcacg
caggcgctcgcgggcgtgggcggcatcgatcccaagcgcgtggcgcagcgcctcatgggc
tacacccacatcggcggccgcccgcgggcggaagactaccgcgcgctgatcgcgccggag
tcgggcgcggagcaggtacagaagaccagcgggcagccctacccgttctttcttgcgcat
gcgttcaacctgccgctcgagcagttcgatgccgtgctcggtccgccggccggctggatc
gtcgaatggaagtgggacggcatccgcgcgcagctggtcaagcgcgcgggcgtcgcctgg
ctgtggtcgcgcggcgaggaactggtgaccgagcgctttcccgagctggccgtgctgggc
gatgcgctgcccgacggcacggtgctcgacggcgagattgccgtctggcgcgacgacagg
gtgcagcccttcgcggagctgcagaggcgcatcggccgcaagacgctgggcgcgaagctg
ctgcgcgagatcccggtggtgctgctggcctacgacgtcctcgaatgggaagggcgcgac
ctgcgcgcgctgccgcagtcgcagcgccggctgctgctcgacgaactcgtcacgcgcatg
ccgcacccgtcgctgctgccgagcccgatgctcaccggcatcgaatggagcgacttcgca
cgccagcgcgaagcggcgcgcagcatgggcgtggaaggcatgatgctcaagcgccgcgac
gcgcagtacggcgtgggccgcaccaaggacgtgggcgtgtggtggaagtggaagatcgat
ccgctcagcatcgacgccgtgcttgtctacgcacagcgcggccacggccggcgcgcgagc
ctctacagcgactacaccttcgccgtctgggacggcccgcccgagcaggaaggccgcaag
ctcgtgccctttgccaaggcctattcgggcctcaccgacgccgagatggcgcgcgtggac
gcgatcatccgcaagaccaccgtcgagagcttcggcccggtgaagagcgtcaagcccacg
ctggtgttcgagctgggtttcgaaggcatcgcgcgcagcgcgcgccacaagagcggcatc
gcggtgcgctttccgcgcatgctgcgctggcgcgaagacaagccggtggcggaagccgac
accctgcagacgctggccgcgctgctgccgtcatga

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