Variovorax paradoxus B4: VAPA_1c53050
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Entry
VAPA_1c53050 CDS
T02835
Name
(GenBank) peptidoglycan-binding lysin domain-containing protein
Organism
vpd
Variovorax paradoxus B4
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysM
Motif
Other DBs
NCBI-ProteinID:
AGU52357
UniProt:
T1XHH6
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Position
1:5569946..5571166
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AA seq
406 aa
AA seq
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MKKLRITVRQRPHLFATLAALAVISGGTTTAAWAQNYPVTPQQRATAQQTAQNGVPLSEL
APNAPDEYTVKPGDTLWAISRLYLLRPWRWPELWGMNISEIANPHRIYPGQILYLDKTGG
RARLTMRRGAGGSADGGTIKLSPRTRFDSLAGMALPTLNPSLIEPFLSEPIVVDADTLQA
APRIVAGNDSRVLLSRGDRAYARGNAETPLLETPGPLKNFRVFRNATPLKDPGTGEILGY
EAQYLGKAQLKRGESTTVETTEDKDVITVVPASIDIIAAREEIRAGDRLLPEPPRQLLSY
VPRAPSSQVEGRIISVYGNAVQFAAQNQVVAINRGTRDGIDSGHVLAILKNGETILDRTG
ARKETIKLPNERIGLLMVFRPFEKVSYALVLEITDTPRAGDFLVNP
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagctccgaatcactgtccgccagcgcccgcatcttttcgccacgttggcagcc
cttgcggtgataagcggcggcacgaccactgcggcgtgggcgcagaactatcccgtcacg
ccgcagcagcgcgccaccgcccagcaaaccgcccagaacggcgttccgctgagcgaactg
gcgcccaacgcgccggacgaatacacggtcaagcccggcgacacgctgtgggccatctcg
cgcctctacctgctgcgcccctggcgctggccggaactgtggggcatgaacatcagcgaa
atcgcgaatccgcaccgcatctacccgggccagatcctctatctggacaagaccggcggc
cgtgcgcgcctgaccatgcgccgcggcgcgggcggcagcgccgacggcggcaccatcaag
ctgtcgccgcgcacgcgcttcgattcgctggccggcatggcattgcccacgctcaacccg
agcctcatcgagcccttcctcagcgaaccgatcgtggtggatgccgacacgctgcaggcc
gcgccgcgcatcgtcgccggcaacgacagccgggtcctgctgtcgcgcggcgaccgtgcc
tatgcgcgcggcaatgcggagacgccgctgctcgaaaccccgggcccgctgaagaatttc
cgcgtgttccgcaacgccacgccgctgaaggacccgggaaccggtgaaatcctcggctat
gaggcgcagtacctgggcaaggcccagctcaagcgtggcgaatcgaccacggtcgagacc
acggaagacaaggacgtcatcaccgtggtgccggccagcatcgacatcatcgcggcgcgc
gaggaaatccgcgccggcgaccgcctgctgcccgaaccgccgcgccagctgctgagctat
gtgccgcgcgccccctcctcgcaggtcgagggccgcatcatctcggtctatggcaacgcg
gtgcagttcgcggcccagaaccaggtggtggccatcaacaggggcacccgcgacggcatc
gacagcggccacgtgctggccatcctgaagaacggcgaaaccattctcgaccggaccggc
gcgcgcaaggaaaccatcaagctccccaacgaacgcatcggcctgctgatggtgttccgg
ccgttcgaaaaggtttcctacgcactggtgctcgagatcaccgacactccgcgtgcgggc
gacttcctcgtcaatccctga
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