KEGG   Variovorax paradoxus EPS: Varpa_0981
Entry
Varpa_0981        CDS       T01392                                 
Name
(GenBank) D-alanine/D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe00470  D-Amino acid metabolism
vpe00550  Peptidoglycan biosynthesis
vpe01100  Metabolic pathways
vpe01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Varpa_0981
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Varpa_0981
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    Varpa_0981
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:vpe01011]
    Varpa_0981
Enzymes [BR:vpe01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     Varpa_0981
Peptidoglycan biosynthesis and degradation proteins [BR:vpe01011]
 Precursor biosynthesis
  Amino acid ligase
   Varpa_0981
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_3 ATP-grasp_4 ATPgrasp_ST CPSase_L_D2 GARS_A RimK ATP-grasp TTL
Other DBs
NCBI-ProteinID: ADU35199
UniProt: E6UUN0
LinkDB
Position
1096866..1097837
AA seq 323 aa
MSLQDPKLFGKVAVLFGGSSAEREVSMMSGTGVLEALRSRGVDAHAFDPSERDLVELKRE
GFARCFVVLHGRHGEDGTVQGALELLGIPYTGSGVMASSVAMDKVMTKRIWQADGLPTPK
YVRLAFDQQSREQIMVVPDVLGLPLIVKPPREGSSIGVTKVEGYSQMQDAVTLSAKYDAD
VLCEEFIEGEEVTCAVLGQGLDARALPVVRIAAPEGAYDYQNKYFTDVVQYKCPSGLPAD
EEHEIQRITLAAYHTLGCRGWGRADVMIRASDRKPFLLEMNTSPGMTSHSLVPMSARAAG
IPYEELCLRVLASASLDAKGGAQ
NT seq 972 nt   +upstreamnt  +downstreamnt
gtgagccttcaggatccaaaacttttcggcaaggtcgccgtgctgtttggcggcagttcc
gcggaacgcgaggtctcgatgatgtcgggcaccggcgtgctcgaggcgctgcgttcgcgc
ggcgtcgatgcgcacgccttcgatccgtccgagcgcgacctggtcgagctcaagcgcgaa
ggctttgcgcgctgcttcgtcgtgctgcacggccgccatggcgaagacggcacggtgcag
ggcgcgctcgagctgctcggcattccctacaccggctcgggcgtcatggcctcgagcgtg
gcgatggacaaggtcatgaccaagcgcatctggcaggccgacggcctgccgacgcccaag
tacgtgcgcctggctttcgaccagcagagccgcgagcagatcatggtggtgcccgacgtg
ctcggcctgccgctgatcgtgaagccaccgcgcgagggttcgtccatcggcgtgacgaag
gtcgaaggctattcacagatgcaggacgcggtcacgctctcggcgaaatacgacgccgat
gtgctctgcgaggagttcatcgagggcgaggaggtgacctgcgccgtgctcggccagggg
ctcgatgcgcgcgcgctcccggtggtgcgcatcgccgcgcccgaaggcgcctacgactac
cagaacaagtatttcaccgacgtcgtgcaatacaagtgcccgagcgggttgccggcggac
gaggagcacgagatccagcgcatcacgctggccgcgtaccacacgctcggctgccgcggc
tggggccgcgccgacgtgatgatccgcgccagcgaccgcaagcccttcctgctcgagatg
aacacctcgcccggcatgaccagccattcgctggtgccgatgtcggcgcgtgcggcgggc
attccctacgaagagctgtgcctgcgcgtgctggcctccgcttcgctggatgccaaggga
ggcgcgcaatag

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