Variovorax paradoxus EPS: Varpa_1699
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Entry
Varpa_1699 CDS
T01392
Name
(GenBank) oligopeptide/dipeptide ABC transporter, ATPase subunit
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Varpa_1699
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_1699
Transporters [BR:
vpe02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Varpa_1699
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_22
PRK
AAA_16
AAA
Zeta_toxin
Mg_chelatase
NACHT
ATP-synt_ab
AAA_5
AAA_19
Myosin_head
NB-ARC
AAA_29
AAA_33
AAA_7
AAA_25
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
ADU35909
UniProt:
E6V5L2
LinkDB
All DBs
Position
complement(1884675..1885670)
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AA seq
331 aa
AA seq
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MTTTAAPLLQVRNLRKHYISPKRWLRADKPAIQAVDGVSFSVARGETLSLVGESGCGKTT
TAKSVMRLVEPTSGSVSLDGEELLTLSPNEMRLRRRQLQIIFQDPYASLNPRLTAGDIVA
EPLRNFGMGAAAERRERVQWLFSRVGLRPEASKKFPHEFSGGQRQRLGIARALALNPKLI
VCDEPVSALDVSVQAQVVNLLMDLQAEFGIAYLFVAHDLAVVRHISHRVAVMYLGHIVEI
ADRDTLFSAPLHPYTEILLSAVPVPNPRTPARRMLLQGDPPSPANPPSGCRFHTRCPMAQ
AVCKEKVPELSERPSSSNGGTSAHLVACHFR
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgaccgcagccccgctgctccaggtgcgcaacctgcgcaagcactacatctcg
cccaagcggtggctgcgggccgacaagccggcgatccaggcggtcgatggggtttcgttc
tccgttgcgcgcggcgaaacgctgtcgctggtcggcgagtcgggctgcggcaagacgacg
accgccaagtcggtgatgcggctggtcgagccgacctctggctcggtgtcgctcgatggc
gaggaactgctcacgctctcgcccaacgagatgcggctgcgccgccgacaactgcagatc
atttttcaggacccgtatgcctcgctgaacccgcgcctgacggccggcgacatcgtggcc
gagccgctgcgcaacttcggcatgggcgcggcggcggagcggcgcgagcgcgtgcagtgg
ctgttctcgcgcgtgggcttgcggcctgaagcctcgaagaaatttccgcacgagttctcg
ggcgggcagcggcagcggctgggcatcgcgcgcgcactggcgctgaacccgaagctcatc
gtctgcgacgagccggtctccgcgctcgacgtgtcggtgcaggcgcaggtggtcaatctg
ctgatggaccttcaggcggaattcggcatcgcgtatctcttcgtcgcgcacgacctcgcg
gtggtgcggcacatcagccatcgcgtggcggtgatgtacctcgggcacatcgtggaaatc
gcggaccgcgacacgctgttttccgcgccgctgcatccgtacaccgagatcctgctgtcg
gccgttcctgtgccgaatccgcgaacgcccgcgcggcgcatgttgctgcaaggcgatccg
ccgagccccgcgaatccgccttcgggctgccgctttcacacacgctgcccgatggcgcag
gccgtgtgcaaggagaaggttcccgagctgagcgagcggccttcgtcttccaacggtggc
accagcgcgcacctggtcgcctgccacttccgctga
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