Variovorax paradoxus EPS: Varpa_4692
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Entry
Varpa_4692 CDS
T01392
Name
(GenBank) Pyridoxal-5'-phosphate-dependent protein beta subunit
KO
K01754
threonine dehydratase [EC:
4.3.1.19
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00260
Glycine, serine and threonine metabolism
vpe00290
Valine, leucine and isoleucine biosynthesis
vpe01100
Metabolic pathways
vpe01110
Biosynthesis of secondary metabolites
vpe01200
Carbon metabolism
vpe01230
Biosynthesis of amino acids
Module
vpe_M00570
Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Varpa_4692
00290 Valine, leucine and isoleucine biosynthesis
Varpa_4692
Enzymes [BR:
vpe01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.19 threonine ammonia-lyase
Varpa_4692
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Gene cluster
GFIT
Motif
Pfam:
PALP
Hydrolase
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
ADU38855
UniProt:
E6UXD8
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All DBs
Position
complement(5115844..5116806)
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AA seq
320 aa
AA seq
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MNKQTTNWRSEIESASRRLREGAAGFLRETPLWKLPASAFGIEVPGVEVWLKLEHMQVSG
SFKARGMMNRLLANDIPESGVVVASGGNAGIATAAAAKALGVRCQVFLPGVSPEAKRARL
RALGAEVVVVGELYPDALAACLTRQKETGALLTHAYDQPEVVAGAGTLGHEIEAQGGLPD
SVLVSVGGGGLIGGLAGWFEQRARVVALEPEKAPTLFRAREAGEPVDVEVGGIAADSLGA
RRIGAISWEITQQQVQDALLLSDESIRAAQQWLWKEMKFAVEPAAALPLAALQTGAYVPR
EGEKVCLIVCGANVDPATVA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaagcaaacgacaaactggcgctctgaaatagaaagcgcctcccgcaggctgcgc
gaaggcgccgccggcttcctgcgcgagacgccgctctggaagctgcccgcatcggccttc
ggcatcgaggtccccggcgtggaggtctggctcaagctcgaacacatgcaggtcagcggc
agcttcaaggcccgcggcatgatgaaccggctgctcgccaacgacattcccgagagcggc
gtggttgtggcctcgggcggcaatgccggcatcgccaccgcagccgccgccaaggcgctg
ggcgtgcgctgccaggtgttcctgcccggcgtgtcgcccgaagccaagcgcgcgcgcctg
cgtgcgctgggtgccgaagtggtcgtggtcggcgagctttatcccgatgcgctggccgcc
tgcctcacgcggcagaaggaaaccggcgccttgctgacccatgcctatgaccagcccgaa
gtcgtggccggtgccggcacgctgggccacgagatcgaagcgcagggcggcctgcccgat
tcggtgctcgtgagcgtgggcggtggcggcctcatcggtggtctcgccggctggttcgag
cagcgcgctcgtgtggtggcgctagaacccgagaaggcgccgacgctctttcgcgcgcgt
gaagccggcgagccggtcgatgtcgaggtcggtggcatcgcggcagactcgctcggcgca
cgccgcatcggtgcgatctcgtgggagatcacgcagcagcaggtgcaggacgcgctgctg
ctgtccgatgaatccatccgcgcggcccagcagtggctgtggaaggaaatgaagttcgcc
gtggagccggccgccgcgctgccgctcgctgcgctgcagaccggcgcctacgtgccgcgc
gagggcgagaaggtgtgcctgatcgtctgcggggcgaacgtggatccggccaccgtcgcc
tga
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