Variovorax paradoxus EPS: Varpa_4999
Help
Entry
Varpa_4999 CDS
T01392
Name
(GenBank) ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
KO
K02897
large subunit ribosomal protein L25
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Varpa_4999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
vpe03011
]
Varpa_4999
Ribosome [BR:
vpe03011
]
Ribosomal proteins
Bacteria
Large subunit
Varpa_4999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_TL5_C
Ribosomal_L25p
Sld7_N
Motif
Other DBs
NCBI-ProteinID:
ADU39159
UniProt:
E6V280
LinkDB
All DBs
Position
5444672..5445343
Genome browser
AA seq
223 aa
AA seq
DB search
MKFVAFERAKQGTGASRRLRISGKTPGIVYGGEGLQPQLIEIDHNALWHALKKEAFHSSI
LEMELGGATSKVLLRDVQYHPFRQLVQHIDFQRVDAKTRLHMKVPLHFKGEEESEAVKTA
HNLVNHVITELEISCLPSDLPEFIEVDLSGLTKNATLHVNDIKLPKGVKYVSHGKQNPVI
VSAVPPLVAEEPAPAAEGATAEGAAPAAGGKAAAKTAKPAAKK
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcgtcgcttttgagcgcgccaagcagggtacgggtgcgagccgccgtctccgc
atttcgggcaagacgcccggtatcgtctatggtggtgaaggcctgcagccgcaactgatc
gaaatcgatcacaacgcgctgtggcatgccctgaagaaggaagccttccactcgtcgatc
ctggaaatggaactcggcggcgccaccagcaaagtgctgctgcgcgacgtgcagtaccac
ccgttccgccaactggtgcaacacatcgacttccagcgcgtggatgccaagacccgcctg
cacatgaaggtgccgctccacttcaagggtgaagaagagtccgaagccgtcaagaccgcg
cacaacctggtgaaccacgtgatcaccgagctggaaatcagctgcctgccgtccgacctg
cccgagttcatcgaagtggacctctccggtctcacgaagaacgccacgctgcacgtcaac
gacatcaagctgcccaagggcgtgaagtatgtgagccacggcaagcagaaccccgtcatc
gtgtcggctgtgccgccgctggtcgccgaagagccggcacctgccgccgaaggcgccact
gctgaaggcgccgcaccggctgccggtggcaaggctgccgccaagacggccaagcccgcc
gcgaagaagtaa
DBGET
integrated database retrieval system
