KEGG   Variovorax paradoxus EPS: Varpa_5009
Entry
Varpa_5009        CDS       T01392                                 
Name
(GenBank) Amidase
  KO
K02433  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe00970  Aminoacyl-tRNA biosynthesis
vpe01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Varpa_5009
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:vpe03029]
    Varpa_5009
Enzymes [BR:vpe01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     Varpa_5009
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     Varpa_5009
Mitochondrial biogenesis [BR:vpe03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    Varpa_5009
SSDB
Motif
Pfam: Amidase
Other DBs
NCBI-ProteinID: ADU39169
UniProt: E6V330
LinkDB
Position
5453959..5455371
AA seq 470 aa
MSSSAPLNELSAQELSAAYRDKRLSPVEVTQAVIAHIERWEPHLQATWLFRPEAALEQAR
ASEARWQRGDALGPLDGVPATIKENIATRGDPMPAGTAAVDLKPATSDAPPAARLKEAGA
VIVSKTTMPDYGMLSSGLSSFHKLARNPWDLGKTPGGSSAGAGAATAAGYGPLHLGTDIG
GSLRLPASWCGIFTLKPSLGRIPIDPPYMGRAAGPMTRTVGDAALMMQALSRPDARDSMS
LPAQDIDWAAFDVSPDHLRGLRIGLLLDAGCGLAVEPEIQTAVEHAARLFEKAGAVVEPM
QPFMSQAMLDGMDHLWRMRSLVDMKALRADQRAKVLPYIREWAESAAEFSGEHVFRSFSQ
FHATRVAAVQACARFDYVISPVSPNMPAAAEAPSPTNDPLRPLEHIGFTVPFNMSEQPAS
SVNCGYAASGLPIGLQIAGHRFDDLGVLRVSRAFEQIREAQRPWPVVPGN
NT seq 1413 nt   +upstreamnt  +downstreamnt
gtgtcttcctccgctcctttgaacgaactctccgcgcaggaactctcggccgcctaccgc
gacaagcgcctgtcgccggtcgaggtgacgcaggccgtgatcgcgcacatcgagcgctgg
gagccgcatctgcaggccacctggctctttcgccccgaggccgcgctcgaacaggcgcgc
gcgtcggaagcgcgctggcagcgcggcgacgcgctcggtccgctcgacggcgtgccagcc
accatcaaggaaaacatcgccacgcgcggcgacccgatgcccgccggcacggctgccgtc
gacctgaagcccgccacttccgacgcaccgccggccgcgcgcctgaaggaagccggcgcg
gtgatcgtgagcaagacgaccatgccggactacggcatgttgtcctcgggcctctcgagc
ttccacaagctggcgcgcaacccgtgggacctcggcaagacgcccggcggctccagcgcc
ggtgctggagccgccactgcggccggttacggcccgctgcatctgggcaccgacatcggt
gggtcgctgcgcctgcccgcgagttggtgcggcatcttcacgctcaagccgagcctgggc
cgcattccgatcgacccgccctacatgggccgtgccgcgggaccgatgacccgcaccgtc
ggcgatgccgcgctgatgatgcaggcgctctccaggcccgacgcgcgcgacagcatgagc
ctgccggcgcaggacatcgactgggccgccttcgacgtgtcgcccgaccatctgcggggc
ctgcgcatcgggctgctgctcgacgcgggctgcggcctcgcggtcgagcccgagatccag
acggcggtcgaacacgccgcgcgcctgttcgagaaggccggtgcggtcgtcgagccgatg
cagcccttcatgtcgcaggccatgctcgacggcatggaccacctgtggcgcatgcgctcg
ctggtggacatgaaggccctgcgcgccgaccagcgcgccaaggtgctgccctacatccgc
gaatgggccgagagcgcggccgagttcagcggcgagcatgtgtttcgcagcttcagccag
ttccatgcgacgcgcgtggcggcggtgcaggcctgcgcgcgcttcgactacgtgatctcg
cccgtgtcgccgaacatgcctgcggcggccgaggcgccttcgccgaccaacgatccgctg
cgtccgctggagcacatcggcttcacggtgccgttcaacatgtccgagcagccggcgtcg
tcggtgaactgcgggtatgcggcgagcggattgccgatcgggctgcagatcgcggggcac
cggttcgatgatctcggcgtgctgcgcgtgtcgcgcgcgttcgagcagattcgcgaggcg
cagcggccttggcctgtggtgcctgggaactga

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