Variovorax paradoxus EPS: Varpa_5009
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Entry
Varpa_5009 CDS
T01392
Name
(GenBank) Amidase
KO
K02433
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:
6.3.5.6
6.3.5.7
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00970
Aminoacyl-tRNA biosynthesis
vpe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Varpa_5009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
vpe03029
]
Varpa_5009
Enzymes [BR:
vpe01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
Varpa_5009
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
Varpa_5009
Mitochondrial biogenesis [BR:
vpe03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Varpa_5009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase
Motif
Other DBs
NCBI-ProteinID:
ADU39169
UniProt:
E6V330
LinkDB
All DBs
Position
5453959..5455371
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AA seq
470 aa
AA seq
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MSSSAPLNELSAQELSAAYRDKRLSPVEVTQAVIAHIERWEPHLQATWLFRPEAALEQAR
ASEARWQRGDALGPLDGVPATIKENIATRGDPMPAGTAAVDLKPATSDAPPAARLKEAGA
VIVSKTTMPDYGMLSSGLSSFHKLARNPWDLGKTPGGSSAGAGAATAAGYGPLHLGTDIG
GSLRLPASWCGIFTLKPSLGRIPIDPPYMGRAAGPMTRTVGDAALMMQALSRPDARDSMS
LPAQDIDWAAFDVSPDHLRGLRIGLLLDAGCGLAVEPEIQTAVEHAARLFEKAGAVVEPM
QPFMSQAMLDGMDHLWRMRSLVDMKALRADQRAKVLPYIREWAESAAEFSGEHVFRSFSQ
FHATRVAAVQACARFDYVISPVSPNMPAAAEAPSPTNDPLRPLEHIGFTVPFNMSEQPAS
SVNCGYAASGLPIGLQIAGHRFDDLGVLRVSRAFEQIREAQRPWPVVPGN
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttcctccgctcctttgaacgaactctccgcgcaggaactctcggccgcctaccgc
gacaagcgcctgtcgccggtcgaggtgacgcaggccgtgatcgcgcacatcgagcgctgg
gagccgcatctgcaggccacctggctctttcgccccgaggccgcgctcgaacaggcgcgc
gcgtcggaagcgcgctggcagcgcggcgacgcgctcggtccgctcgacggcgtgccagcc
accatcaaggaaaacatcgccacgcgcggcgacccgatgcccgccggcacggctgccgtc
gacctgaagcccgccacttccgacgcaccgccggccgcgcgcctgaaggaagccggcgcg
gtgatcgtgagcaagacgaccatgccggactacggcatgttgtcctcgggcctctcgagc
ttccacaagctggcgcgcaacccgtgggacctcggcaagacgcccggcggctccagcgcc
ggtgctggagccgccactgcggccggttacggcccgctgcatctgggcaccgacatcggt
gggtcgctgcgcctgcccgcgagttggtgcggcatcttcacgctcaagccgagcctgggc
cgcattccgatcgacccgccctacatgggccgtgccgcgggaccgatgacccgcaccgtc
ggcgatgccgcgctgatgatgcaggcgctctccaggcccgacgcgcgcgacagcatgagc
ctgccggcgcaggacatcgactgggccgccttcgacgtgtcgcccgaccatctgcggggc
ctgcgcatcgggctgctgctcgacgcgggctgcggcctcgcggtcgagcccgagatccag
acggcggtcgaacacgccgcgcgcctgttcgagaaggccggtgcggtcgtcgagccgatg
cagcccttcatgtcgcaggccatgctcgacggcatggaccacctgtggcgcatgcgctcg
ctggtggacatgaaggccctgcgcgccgaccagcgcgccaaggtgctgccctacatccgc
gaatgggccgagagcgcggccgagttcagcggcgagcatgtgtttcgcagcttcagccag
ttccatgcgacgcgcgtggcggcggtgcaggcctgcgcgcgcttcgactacgtgatctcg
cccgtgtcgccgaacatgcctgcggcggccgaggcgccttcgccgaccaacgatccgctg
cgtccgctggagcacatcggcttcacggtgccgttcaacatgtccgagcagccggcgtcg
tcggtgaactgcgggtatgcggcgagcggattgccgatcgggctgcagatcgcggggcac
cggttcgatgatctcggcgtgctgcgcgtgtcgcgcgcgttcgagcagattcgcgaggcg
cagcggccttggcctgtggtgcctgggaactga
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