Variovorax paradoxus EPS: Varpa_5220
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Entry
Varpa_5220 CDS
T01392
Name
(GenBank) Holliday junction resolvase YqgF
KO
K07447
putative pre-16S rRNA nuclease [EC:3.1.-.-]
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vpe03009
]
Varpa_5220
Ribosome biogenesis [BR:
vpe03009
]
Prokaryotic type
rRNA processing factors
Varpa_5220
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Gene cluster
GFIT
Motif
Pfam:
RuvX
Motif
Other DBs
NCBI-ProteinID:
ADU39376
UniProt:
E6V5C2
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All DBs
Position
complement(5674654..5675079)
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AA seq
141 aa
AA seq
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MSDSAASSSVPVPPHFQTFLAFDFGLKRTGVASGNRLLQSATPQATIKAEGDARFAQVEA
RIKEWQPDALVIGVPYHPDGAPHENTRRAQKFARQLRGRFNLQVFEVDERYSTTEALSSG
ARDADAASACIILEQFLRSLP
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacagtgctgcgtcctcatctgttcccgtcccgccccatttccagaccttcctg
gccttcgatttcggcctgaagcgcacgggcgtggccagcggcaaccggctgcttcaatcg
gccaccccgcaggccaccatcaaggccgagggcgatgcccgcttcgcgcaggtcgaggcc
cgcatcaaggaatggcagcccgacgccctggtgatcggcgtgccctaccaccccgacggc
gccccgcacgagaacacccgccgcgcgcagaagttcgcgcgccagttgcgcggccgtttc
aacctgcaggtgttcgaggtcgacgagcgctacagcacgaccgaggcgctgtcttccggc
gccagagacgccgacgccgcttcggcctgcatcatcctggagcaatttttgaggagtctc
ccgtga
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