Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_04380
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Entry
M634_04380 CDS
T02761
Name
(GenBank) endonuclease V
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
vpf
Vibrio parahaemolyticus O1:Kuk FDA_R31
Pathway
vpf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M634_04380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpf03400
]
M634_04380
Enzymes [BR:
vpf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
M634_04380
DNA repair and recombination proteins [BR:
vpf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
M634_04380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AGQ90121
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All DBs
Position
I:889163..890050
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AA seq
295 aa
AA seq
DB search
MTNMKNKFGNKLIGAHVSAAGGVDQAPLRAREIGANAFALFTKNQRQWVAKPLEAKTISA
FKANCKMLGFSAEHILPHDSYLINLGAPEVDKLDKSRAAFIDEMERCNQLGLTLLNFHPG
SHLKKVSEQECLATIAESINLAHKTVPDVVAVIENTAGQGTNLGWKFEHLAEIIEQVEDK
DRVGVCIDTCHTFTAGYDLRTKEDCERTFAEFDRIVGMHYLRAMHLNDSKVEFASKVDRH
HSLGKGEIGWDCFEYIAKDSRFDGIPLILETIDPDIWQQEINTLRQFHLAAINNQ
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacatgaaaaacaagtttggtaataaactcataggtgcacatgtctctgctgct
ggtggggtcgatcaagcgccgttgagagctcgcgaaattggcgcgaatgcattcgcacta
tttacaaaaaaccaacgccagtgggtggcgaagcctttagaagcaaaaaccatcagtgca
tttaaagcgaactgtaaaatgctgggtttcagcgcagaacatattctcccgcacgactca
tacctgattaacttaggtgctccagaagtggacaagttggataagtcacgcgctgcgttc
atcgatgaaatggagcgttgtaatcagttgggactgactttgcttaacttccacccgggt
agtcacctaaagaaagtctctgaacaggaatgcttggcaacgattgctgagtcgatcaac
ttagcgcacaaaacagtaccggatgtggtagcggtgattgagaatactgctggacagggc
acaaatcttggctggaagtttgagcacttagctgaaatcatcgagcaagtggaagataaa
gatcgtgtcggtgtttgtattgatacctgccatacctttacggctggttatgacttgcgt
acaaaagaagattgcgaacgcacttttgctgaatttgaccgtattgtgggtatgcactat
ttgcgagcaatgcatctaaatgattcaaaagtagagtttgctagcaaagtggatcgtcac
cattctttaggtaaaggagagatcgggtgggattgtttcgagtacattgcgaaagactct
cgttttgatggtatccctctgattttagaaacaattgatccggacatatggcagcaagag
atcaacacactgcgccagtttcatttagccgctattaacaaccaataa
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