Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_08370
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Entry
M636_08370 CDS
T02760
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpk03019
]
M636_08370
03009 Ribosome biogenesis [BR:
vpk03009
]
M636_08370
Messenger RNA biogenesis [BR:
vpk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M636_08370
Ribosome biogenesis [BR:
vpk03009
]
Prokaryotic type
rRNA processing factors
M636_08370
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AGQ97495
LinkDB
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Position
I:43161..44630
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AA seq
489 aa
AA seq
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MSAELLLNVTPSETRVAMIEGGVLQEIHIERESRRGIVGNIYKGKVSRVLPGMQAAFVDI
GLDKAAFLHASDIVPHTECVAENEKQQFQVRDISELVRQGQDIVVQVVKDPLGTKGARLT
TDITLPSRYLVFMPGASHVGVSQRIESESERERLKKVVNHYCDEHGGFIIRTAAEGADEK
ELSQDAAFLKRLWLKVMERRSKYKTRSTLYGELGLAQRILRDFVGTELDKILVDSRLEYE
NLKEFTSEYVPELTDKLELYEGDKPIFDMYDTENEIQRSLERKVELKSGGYLIIDQTEAM
TTIDINTGAFVGRRNLEETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMASEEHRQRV
LTSLEAALSKDRVKTNINGFTQLGLVEMTRKRTRESIEHILCSGCPTCEGRGTVKTVETV
CYEILREITRVNRAYDADNFVVYASPFVAEALLGDESHALAELEVFIGKQVRIQAEPLYI
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagaattgctgcttaacgtgaccccgagtgaaactcgtgtggccatgattgaa
ggtggagtactacaagaaattcatatcgagcgcgaatctcgtcgcggcattgtgggcaac
atttacaaaggcaaagtaagccgagtgctgcctggcatgcaagcggctttcgtcgatatc
ggtttagataaagcggcgtttttacatgcgtctgatatcgttccgcatactgaatgtgtg
gcagagaacgagaaacagcagtttcaagttcgtgacatttctgaattggttcgccaaggt
caggatatcgtcgtacaggtagttaaagatcctcttggcactaaaggtgcgcgtttaact
actgacatcacacttccttcccgttatctcgtctttatgcctggcgctagccacgttggt
gtatcgcaacgtattgaaagcgaaagcgaacgtgagcgccttaaaaaagtggtgaatcac
tactgcgatgagcacggtggtttcattatccgcacggccgcagaaggggcggacgagaaa
gaactctctcaagatgctgcgttcctaaaacgcttatggctgaaagtcatggagcgtcgt
tctaagtacaagacacgttcaacgctgtatggcgagcttggtcttgcacaacgtattttg
cgtgacttcgttggaacggaactcgacaagattttggtcgattcacgtttagaatatgag
aacctcaaagagtttacttctgagtacgtaccggagctgaccgataagcttgagctttac
gaaggtgacaagcctatctttgatatgtacgacactgagaacgaaattcaacgctctttg
gagcgcaaagttgagctcaagtcgggtggttacttaatcatcgatcagacagaagcgatg
accaccatcgacatcaacactggtgcgtttgttggtcgtcgtaacttagaagagaccatc
tttaataccaatattgaagcgactcaagccattgctcgccagttacgtctgcgtaaccta
ggtggcatcatcattatcgactttatcgatatggcgtcagaagagcatcgtcagcgagta
ctaacttcgttagaagctgcattgtcgaaagaccgcgtgaaaaccaacatcaatggcttt
acgcagttaggtctggttgaaatgacgcgtaagcgtacgcgcgaaagtattgaacatatt
ctttgttctggttgtcctacttgtgaaggccgtggcaccgtgaaaacggttgaaacggtg
tgttacgagattctgcgcgagatcactcgtgtaaaccgagcgtacgatgccgacaacttt
gtcgtatacgcatcgccatttgttgcagaagcgcttttgggtgatgagtctcatgcgctg
gcagaacttgaagtatttattggtaagcaagtccgtattcaggctgaacccctgtacatt
caggaacagtttgacgtcgtgatgatgtaa
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