Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_09025
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Entry
M636_09025 CDS
T02760
Name
(GenBank) RNA polymerase sigma factor AlgU
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpk03021
]
M636_09025
Transcription machinery [BR:
vpk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M636_09025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_16
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AGQ97592
LinkDB
All DBs
Position
I:164643..165221
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AA seq
192 aa
AA seq
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MNEQLTDQVLIERVQNGDKQAFNLLVTKYQNKVCNLISRYVSNPGDVPDVAQEAFIKAYR
AIPSFRGESAFYTWLYRIAVNTAKNHIVAQGRRPPATDVDAEEAEFYETGSALKEISNPE
NLTLSKELQRVVFSAIEALPEDLKTAMTLRELDGLSYEEIAEVMDCPVGTVRSRIFRARE
AVEKKIRPLLQR
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagcagctgaccgatcaagtattgattgagcgagttcagaatggtgataagcaa
gcattcaacctgctggtaacaaagtatcagaacaaggtgtgtaatcttatttccagatac
gttagtaatcctggcgatgtaccagatgtagcacaagaagcctttatcaaagcttaccga
gctatccctagctttcgcggggaaagtgcgttttatacgtggctgtatcgcattgcagtg
aatactgcgaaaaatcacattgtggctcaagggcgcagacccccagcgacagatgttgat
gctgaagaagctgaattttacgaaacaggtagtgcacttaaagaaatttcgaaccctgag
aacttaacgttgtccaaagaattgcaacgggtagtgttcagtgcaatcgaagctttacct
gaagatttaaagacagcaatgacattgcgagagctcgatggcttaagttatgaagaaatt
gctgaagtaatggattgcccggtaggaacggtacgttcacgtatcttccgtgctcgtgaa
gcggtggaaaagaaaatcagacctcttttacagcgctag
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