KEGG   Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_21775
Entry
M636_21775        CDS       T02760                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
vpk  Vibrio parahaemolyticus O1:K33 CDC_K4557
Brite
KEGG Orthology (KO) [BR:vpk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vpk03032]
    M636_21775 (gyrB)
   03400 DNA repair and recombination proteins [BR:vpk03400]
    M636_21775 (gyrB)
Enzymes [BR:vpk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     M636_21775 (gyrB)
DNA replication proteins [BR:vpk03032]
 Prokaryotic type
  DNA Topoisomerases
   M636_21775 (gyrB)
DNA repair and recombination proteins [BR:vpk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      M636_21775 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim GyrB_hook HATPase_c HATPase_c_3 SMC_hinge Toprim_4
Other DBs
NCBI-ProteinID: AGQ99571
LinkDB
Position
I:complement(2909115..2911532)
AA seq 805 aa
MSENYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCKDIV
VTIHEDNSVSVSDDGRGIPTEMHPEEKVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKVVLTIHRGGHIHTQTYRHGEPEAPLAVVGDTDKTGTQIRFWPSAETFSNTE
FHYDILAKRLRELSFLNSGVSIKLIDEREADKQDHFMYEGGIQAFVQHLNTNKTPIIEKI
FHFDLEREDGISVEVAMQWNDGFQENIFCFTNNIPQRDGGTHLAGFRAALTRTLNSFMDK
EGFSKKAKTATSGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAVESAMGEKLSE
FLVENPSEAKMVCSKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQEKDPALSE
LYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG
RDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYVYIAQPPLYKVKK
GKQEQYIKDEEAMNQYQVSLALDNASLHVNAEAPALAGEALEKLVQQYNAGIKLADRMSR
RYPRALVHELIYTSRLTAEQCHDAAVVEAWTKQLVEQLNAKEVGASQYSYEVELHAELGL
SLPKIIVRTHGVTHEHALSVDFLNSKEYGKLADLSEVLDGLLEEGAYIKRGERTLPVSSF
AEALEWLVKESMRGLSRQRYKGLGEMNPDQLWETTMDPETRRMMQVTIEDAVGADQLFTT
LMGDQVEPRRHFIEENALKVANLDV
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgtctgaaaattacgattcatcgagtattaaggtactgaagggtctggatgcggtacgt
aagcgtccaggtatgtacatcggggacacggacgacggcaccggccttcaccacatggtt
ttcgaggtggtggataactcaattgatgaagcgttggcaggtcactgtaaagacatcgtt
gtgacaattcatgaggacaactcggtttccgttagcgatgatggtcgtggcattccaaca
gaaatgcacccagaagaaaaagtatcagcagcagaagttatcatgaccgtactgcacgct
ggtggtaagttcgatgataactcgtacaaagtatcaggcggtcttcacggcgtgggtgtt
tcggtagtaaacgcactgtcagaaaaagtggtactaaccatccatcgtggcggtcatatc
cacacgcaaacttaccgtcatggtgagcctgaagcgcctctagcggttgtgggtgatacg
gataaaaccggtacacaaattcgtttctggccaagtgcagaaactttctctaacactgaa
ttccattacgacatcctagcaaaacgtctgcgtgagctatcgttcttgaactcaggcgtt
tctatcaagcttattgatgagcgcgaagcggacaagcaagatcacttcatgtatgaaggt
ggtattcaagcgttcgttcagcacttaaacaccaacaaaacaccaatcatcgagaaaatc
ttccacttcgacttagaacgtgaagacggtatctcggtagaagtggcaatgcagtggaac
gatggtttccaagagaacatcttctgtttcaccaacaacattccacagcgcgatggtggt
actcaccttgctggtttccgtgcggcactaacacgtacgctaaacagctttatggataaa
gaaggcttctcgaagaaagcgaaaacagcaacgtcaggcgacgatgcgcgtgaaggtttg
acagccgttgtttcggtaaaagtgcctgatccaaaattctcgagccaaaccaaagacaaa
ctggtttcttctgaagtgaaatcagcggttgaatcggcgatgggtgagaaattatctgag
ttcttggtcgaaaacccaagcgaagcgaagatggtttgttcgaaaatcatcgatgcagca
cgtgcacgtgaagccgcacgtaaagcgcgtgaaatgactcgtcgtaaaggcgcgctagac
ctagcaggcctaccaggcaaacttgcagactgtcaggaaaaagatccggcactctctgaa
ctatacattgtggagggtgactctgcgggtggttcagctaagcagggtcgtaatcgtaag
aatcaggcaatcctaccactgaaaggtaagatcctgaacgtagaaaaagcacgtttcgac
aagatgttgtcttcgcaagaagttgcaacgcttattacagcacttggctgtggtatcggt
cgtgacgagtacaacccggacaaactgcgttaccacaacatcatcatcatgaccgatgct
gacgtcgatggttcgcacatccgtacgctactgttgactttcttctaccgtcaaatgcca
gagcttatcgagcgtggttacgtgtacatcgctcagccaccactatacaaagtgaagaag
ggcaaacaagagcagtacatcaaagatgaagaagcgatgaaccaataccaagtatcattg
gcattggacaacgcatcactgcacgtaaacgcagaagctccagctctagctggcgaagcg
ctagaaaaactggttcaacaatacaatgcaggtatcaagcttgctgaccgtatgagccgt
cgttaccctcgcgccttagtgcatgagcttatctacacatctcgtctaacggctgagcag
tgtcatgatgcagcagtagtagaagcttggacaaaacaacttgttgagcaactaaacgcg
aaagaagtgggtgcaagccaatacagctacgaagtggagctgcacgcagagcttggtttg
agcctgccgaagatcatcgttcgtacacacggtgtgactcacgagcacgcgctaagtgtt
gatttcctaaactcaaaagaatatggcaagctggcggacctttctgaagtcctagacggt
cttctagaagagggcgcgtacatcaaacgtggtgaacgtactctgccagtatcaagcttt
gctgaagcacttgagtggttggttaaagaatcgatgcgtggtctaagccgtcagcgctac
aaaggtctaggtgagatgaacccagatcagctttgggaaaccacaatggacccagagacg
cgtcgcatgatgcaagtaacgattgaagatgcggtaggcgcagaccaattgttcacaacg
ctaatgggtgaccaagttgaacctcgtcgtcacttcatcgaagagaacgcactgaaggtt
gcaaacctagacgtgtaa

DBGET integrated database retrieval system