KEGG   Virgibacillus dokdonensis: A21D_00149
Entry
A21D_00149        CDS       T05261                                 
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
  KO
K03702  excinuclease ABC subunit B
Organism
vpn  Virgibacillus dokdonensis
Pathway
vpn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vpn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    A21D_00149 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vpn03400]
    A21D_00149 (uvrB)
DNA repair and recombination proteins [BR:vpn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A21D_00149 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      A21D_00149 (uvrB)
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII UVR DEAD AAA_30 DNA_pol_A AAA UB2H AAA_19 AAA_7 AAA_22 DUF87 HerA_C Kinesin TrwB_AAD_bind P-loop_SecA AAA_16 UvrD-helicase Gluconate_2-dh3
Other DBs
NCBI-ProteinID: AUJ23263
UniProt: A0A2K9IWX7
LinkDB
Position
complement(127606..129588)
AA seq 660 aa
MENQFELVAKYEPKGDQPQAIKEIVEHIKAGKRHQTLLGATGTGKTFTMSNVINEINRPT
LVIAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPSTDTFIEKDASINDEID
KLRHSATSALFERRDVLIVASVSCIYGLGSPEEYKSQVLSIRTGMEKDRDQLLRELVDIQ
YARNDINFQRGTFRVRGDSVEIIPASREEHCIRVEFFGDEVDRIREVDALTGEIIGDREH
IAIFPASHFVTREEKLKLAIKNIEKELAERLKELRDQGKLLEAQRLEQRTNYDLEMMHEM
GFCSGIENYSRHLTLREAGATPYTLLDFFPDDFLVMIDESHVTLPQIRGMFNGDQARKQV
LVDHGFRLPSALDNRPLRFEEFEKATNQLVYVSATPGPYEQEHSPTMTEQIIRPTGLLDP
EVEVRPIEGQIDDLIGEIHKRSEKNERVLVTTLTKKMSEDLTDYLKELGIKVAYLHSEIK
TLERIELIRDLRVGKYDVLVGINLLREGLDIPEVSLVTILDADKEGFLRSERSLIQTMGR
AARNENGMVIMYANKITKSMQIAIDETYRRRAKQIAYNEKYGITPTTIKKDVRDVIRATV
AAEDQETYESKTKSVTKLAKQDKEKVIANMEKEMKEAAKALDFEKAAELRDVILELKAGR
NT seq 1983 nt   +upstreamnt  +downstreamnt
gtggaaaatcaatttgagctagttgccaaatatgaaccaaaaggtgaccaaccacaagca
attaaagaaattgttgaacatattaaggcaggaaaaaggcaccaaacacttttaggcgca
acaggaactggtaaaacttttactatgtcgaatgtaattaacgagatcaatcggccaact
ttagtgattgcgcataataaaactttagccggtcaactatatagtgagtttaaagaattc
tttcctaataatgctgtggaatattttgttagctactacgattactatcaacctgaagct
tacgtaccatccacggatacattcattgaaaaagatgcgagtataaatgatgaaattgat
aaactaaggcactctgctacatcagcattgtttgagcgacgagatgttttaattgttgcg
agtgtttcctgtatttatggattaggttctccagaagaatataaaagtcaagtactctct
attcggacaggaatggaaaaggatcgagatcaactattacgtgaacttgtagacattcaa
tatgctcgcaatgatattaacttccaacgcgggacgtttcgagtacgtggtgactctgtg
gagataattccagcttctagagaggaacactgtatacgcgtcgaattctttggtgatgaa
gtcgaccgcattcgtgaagtagatgcattgaccggggagattattggcgatcgagagcat
attgctattttcccagcctctcacttcgtaacacgagaggaaaaattgaagcttgctatt
aaaaatattgaaaaggaattagcagagcgtttaaaagagttacgcgatcaagggaaatta
ctagaagcacaacgtttagaacaacggacgaattacgatctggaaatgatgcatgaaatg
ggcttctgttcaggcattgaaaattattcacgccatcttactttgcgtgaagcaggtgcg
acaccatatacattgcttgatttctttcctgatgattttctagttatgattgatgaatca
catgtcacactcccacaaattcgtggcatgtttaacggggaccaagcgcgaaaacaagta
cttgtagatcatggattcagattgccgtcagcgctagataaccgcccgttgcgttttgaa
gaatttgaaaaagctacgaaccaactcgtttatgtttctgccacaccaggaccatacgaa
caagaacattcgccaacaatgacagaacaaatcattcgaccaacaggtctcttggatcca
gaagtagaagtaagaccaattgaaggacaaattgatgacttaatcggggaaattcataaa
cgttccgagaaaaacgaacgtgtgctagtcactacgttaacgaaaaaaatgtctgaagat
ctaaccgattatttaaaagaacttggtataaaagttgcttacttgcattcagagattaaa
acattggagcggattgaattaattcgtgatttacgtgttggtaaatatgatgttctcgtt
ggaataaatttattacgtgaaggtcttgatattccagaagtatctttagtgacaatttta
gatgcggataaggagggatttttacgttcagaaaggtcccttatccaaacgatggggcgg
gcagcgcgtaatgaaaatggcatggttattatgtatgcaaataaaattacgaagtcgatg
caaatagccattgatgagacgtatcgtcggcgtgcaaagcagattgcttataacgaaaag
tatggtattactcctacgacgattaagaaagacgtacgagatgtaattcgagcaactgtt
gctgctgaagaccaagaaacgtacgaaagtaaaacgaaaagtgttacgaagctagcaaag
caggataaagaaaaagtaatagcgaatatggaaaaagaaatgaaggaagctgccaaagca
ttggattttgaaaaagcagctgaacttcgagatgtcatacttgaactgaaagcaggaagg
tga

DBGET integrated database retrieval system