Virgibacillus dokdonensis: A21D_00149
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Entry
A21D_00149 CDS
T05261
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A21D_00149 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpn03400
]
A21D_00149 (uvrB)
DNA repair and recombination proteins [BR:
vpn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A21D_00149 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A21D_00149 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
DNA_pol_A
AAA
UB2H
AAA_19
AAA_7
AAA_22
DUF87
HerA_C
Kinesin
TrwB_AAD_bind
P-loop_SecA
AAA_16
UvrD-helicase
Gluconate_2-dh3
Motif
Other DBs
NCBI-ProteinID:
AUJ23263
UniProt:
A0A2K9IWX7
LinkDB
All DBs
Position
complement(127606..129588)
Genome browser
AA seq
660 aa
AA seq
DB search
MENQFELVAKYEPKGDQPQAIKEIVEHIKAGKRHQTLLGATGTGKTFTMSNVINEINRPT
LVIAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPSTDTFIEKDASINDEID
KLRHSATSALFERRDVLIVASVSCIYGLGSPEEYKSQVLSIRTGMEKDRDQLLRELVDIQ
YARNDINFQRGTFRVRGDSVEIIPASREEHCIRVEFFGDEVDRIREVDALTGEIIGDREH
IAIFPASHFVTREEKLKLAIKNIEKELAERLKELRDQGKLLEAQRLEQRTNYDLEMMHEM
GFCSGIENYSRHLTLREAGATPYTLLDFFPDDFLVMIDESHVTLPQIRGMFNGDQARKQV
LVDHGFRLPSALDNRPLRFEEFEKATNQLVYVSATPGPYEQEHSPTMTEQIIRPTGLLDP
EVEVRPIEGQIDDLIGEIHKRSEKNERVLVTTLTKKMSEDLTDYLKELGIKVAYLHSEIK
TLERIELIRDLRVGKYDVLVGINLLREGLDIPEVSLVTILDADKEGFLRSERSLIQTMGR
AARNENGMVIMYANKITKSMQIAIDETYRRRAKQIAYNEKYGITPTTIKKDVRDVIRATV
AAEDQETYESKTKSVTKLAKQDKEKVIANMEKEMKEAAKALDFEKAAELRDVILELKAGR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaatcaatttgagctagttgccaaatatgaaccaaaaggtgaccaaccacaagca
attaaagaaattgttgaacatattaaggcaggaaaaaggcaccaaacacttttaggcgca
acaggaactggtaaaacttttactatgtcgaatgtaattaacgagatcaatcggccaact
ttagtgattgcgcataataaaactttagccggtcaactatatagtgagtttaaagaattc
tttcctaataatgctgtggaatattttgttagctactacgattactatcaacctgaagct
tacgtaccatccacggatacattcattgaaaaagatgcgagtataaatgatgaaattgat
aaactaaggcactctgctacatcagcattgtttgagcgacgagatgttttaattgttgcg
agtgtttcctgtatttatggattaggttctccagaagaatataaaagtcaagtactctct
attcggacaggaatggaaaaggatcgagatcaactattacgtgaacttgtagacattcaa
tatgctcgcaatgatattaacttccaacgcgggacgtttcgagtacgtggtgactctgtg
gagataattccagcttctagagaggaacactgtatacgcgtcgaattctttggtgatgaa
gtcgaccgcattcgtgaagtagatgcattgaccggggagattattggcgatcgagagcat
attgctattttcccagcctctcacttcgtaacacgagaggaaaaattgaagcttgctatt
aaaaatattgaaaaggaattagcagagcgtttaaaagagttacgcgatcaagggaaatta
ctagaagcacaacgtttagaacaacggacgaattacgatctggaaatgatgcatgaaatg
ggcttctgttcaggcattgaaaattattcacgccatcttactttgcgtgaagcaggtgcg
acaccatatacattgcttgatttctttcctgatgattttctagttatgattgatgaatca
catgtcacactcccacaaattcgtggcatgtttaacggggaccaagcgcgaaaacaagta
cttgtagatcatggattcagattgccgtcagcgctagataaccgcccgttgcgttttgaa
gaatttgaaaaagctacgaaccaactcgtttatgtttctgccacaccaggaccatacgaa
caagaacattcgccaacaatgacagaacaaatcattcgaccaacaggtctcttggatcca
gaagtagaagtaagaccaattgaaggacaaattgatgacttaatcggggaaattcataaa
cgttccgagaaaaacgaacgtgtgctagtcactacgttaacgaaaaaaatgtctgaagat
ctaaccgattatttaaaagaacttggtataaaagttgcttacttgcattcagagattaaa
acattggagcggattgaattaattcgtgatttacgtgttggtaaatatgatgttctcgtt
ggaataaatttattacgtgaaggtcttgatattccagaagtatctttagtgacaatttta
gatgcggataaggagggatttttacgttcagaaaggtcccttatccaaacgatggggcgg
gcagcgcgtaatgaaaatggcatggttattatgtatgcaaataaaattacgaagtcgatg
caaatagccattgatgagacgtatcgtcggcgtgcaaagcagattgcttataacgaaaag
tatggtattactcctacgacgattaagaaagacgtacgagatgtaattcgagcaactgtt
gctgctgaagaccaagaaacgtacgaaagtaaaacgaaaagtgttacgaagctagcaaag
caggataaagaaaaagtaatagcgaatatggaaaaagaaatgaaggaagctgccaaagca
ttggattttgaaaaagcagctgaacttcgagatgtcatacttgaactgaaagcaggaagg
tga
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