Virgibacillus dokdonensis: A21D_01325
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Entry
A21D_01325 CDS
T05261
Name
(GenBank) hypothetical protein
KO
K04485
DNA repair protein RadA/Sms
Organism
vpn
Virgibacillus dokdonensis
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpn03400
]
A21D_01325
DNA repair and recombination proteins [BR:
vpn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A21D_01325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Rubredoxin_2
ChlI
DnaB_C
Lon_C
Rad51
AAA_22
AAA_16
NTPase_1
AAA
AAA_24
AAA_14
ABC_tran
nSTAND3
NACHT
GvpD_P-loop
ATPase_2
RecA
AAA_5
SLFN-g3_helicase
KTI12
Isochorismatase
ATP-synt_ab
RsgA_GTPase
HypA
MCM
zf-RING_10
zinc_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AUJ24424
UniProt:
A0A2K9IYA1
LinkDB
All DBs
Position
complement(1401771..1403144)
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AA seq
457 aa
AA seq
DB search
MAKRKTKFVCQDCGYEVAKWLGKCPGCNNWNTFVEEIEITGGRQKQAFQTGNRSVGKPEK
ITAIKSQQEPRVTTDMKEFNRVLGGGIVPGSLVLVGGDPGIGKSTLLLQISSQLADKSLS
VLYISGEESTRQTKLRADRLGVTSDELYVLAETNLLDIANQIEAIKPSFVVIDSIQTVYR
EEITSAPGSVSQVRECTSELMKIAKTNGIPIFIVGHVTKEGTIAGPRLLEHMVDAVLYFE
GERHHTYRILRGVKNRFGSTNEMGIFEMKEAGLREVLNPSEIFLEERSQGASGSTVVASM
EGTRPVLVEIQALISPTAFGNPRRMATGVDQNRVPLLMAVLEKRVGLMLQNQDAYIKVAG
GVRLDEPAIDLAIAVSIASSFRDQPTKPEDIFIGEVGLTGEIRRVSRIEQRVQEAAKLGF
KRVICPKNNLGGWTTPNNIEIIGVNTVQEALQIGVSR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
ttggcgaagcgtaaaacgaaatttgtttgtcaggattgtgggtatgaagtagcaaaatgg
cttggcaagtgtcctggttgtaataattggaatacgtttgtagaagagattgaaattact
ggtgggagacaaaagcaagcttttcaaacaggtaataggtcagtaggaaagcctgaaaaa
attacagcaattaaatcacaacaagaaccgagagtgacaacagatatgaaagagtttaac
cgtgtgctcggcggcggcattgtgccaggctctctcgttctagttggtggtgatccaggg
attggaaagtctaccctgttattacaaatatcatctcaattggcagataaaagtctgtct
gttttatacatttccggggaagaatcaacgagacagacaaagttgcgtgctgatcgttta
ggtgtaacttccgacgagttatatgtgttagcagaaacaaatttacttgatatagcaaat
caaatcgaagcaataaaaccatcatttgtcgttattgattccattcaaacggtctatcgt
gaagagattactagtgcaccgggcagtgtttctcaagtaagagaatgtacatctgaattg
atgaaaattgctaaaacgaatggaatacccatctttattgtgggacacgtgacgaaagag
gggacgattgctggcccaaggcttttagagcatatggtggacgctgtgctatattttgaa
ggggagcgtcatcatacgtaccgcattttaagaggtgtgaaaaatcggtttggtagtacg
aatgaaatgggcatctttgagatgaaggaagcggggctacgcgaagttttaaacccttca
gaaatatttttggaagaacgttcacaaggagcttcggggtctaccgtcgtagcttctatg
gagggaacaagaccagtattggtagagatacaggcattaatttctcctacagcgtttggt
aaccctcgtagaatggcgacaggagtagatcagaaccgtgttccactactgatggcagtg
ttagaaaaacgtgtcggtttaatgctgcaaaaccaagatgcatatattaaagttgctggt
ggtgttagacttgatgaacctgccattgatttagcaattgctgttagtattgcttctagc
ttccgtgatcaaccaacaaagccggaagatatttttattggggaagtcggactgacggga
gaaataagacgggtatctcgcattgaacaacgtgttcaagaagctgccaaactaggattt
aaacgcgttatttgtcctaaaaataatttggggggttggacaacgccaaataacatcgaa
attatcggtgtaaacacggtgcaagaagcgttacaaatcggggtaagtagataa
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