KEGG   Virgibacillus dokdonensis: A21D_01325
Entry
A21D_01325        CDS       T05261                                 
Name
(GenBank) hypothetical protein
  KO
K04485  DNA repair protein RadA/Sms
Organism
vpn  Virgibacillus dokdonensis
Brite
KEGG Orthology (KO) [BR:vpn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vpn03400]
    A21D_01325
DNA repair and recombination proteins [BR:vpn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     A21D_01325
SSDB
Motif
Pfam: AAA_25 ATPase Rubredoxin_2 ChlI DnaB_C Lon_C Rad51 AAA_22 AAA_16 NTPase_1 AAA AAA_24 AAA_14 ABC_tran nSTAND3 NACHT GvpD_P-loop ATPase_2 RecA AAA_5 SLFN-g3_helicase KTI12 Isochorismatase ATP-synt_ab RsgA_GTPase HypA MCM zf-RING_10 zinc_ribbon_6
Other DBs
NCBI-ProteinID: AUJ24424
UniProt: A0A2K9IYA1
LinkDB
Position
complement(1401771..1403144)
AA seq 457 aa
MAKRKTKFVCQDCGYEVAKWLGKCPGCNNWNTFVEEIEITGGRQKQAFQTGNRSVGKPEK
ITAIKSQQEPRVTTDMKEFNRVLGGGIVPGSLVLVGGDPGIGKSTLLLQISSQLADKSLS
VLYISGEESTRQTKLRADRLGVTSDELYVLAETNLLDIANQIEAIKPSFVVIDSIQTVYR
EEITSAPGSVSQVRECTSELMKIAKTNGIPIFIVGHVTKEGTIAGPRLLEHMVDAVLYFE
GERHHTYRILRGVKNRFGSTNEMGIFEMKEAGLREVLNPSEIFLEERSQGASGSTVVASM
EGTRPVLVEIQALISPTAFGNPRRMATGVDQNRVPLLMAVLEKRVGLMLQNQDAYIKVAG
GVRLDEPAIDLAIAVSIASSFRDQPTKPEDIFIGEVGLTGEIRRVSRIEQRVQEAAKLGF
KRVICPKNNLGGWTTPNNIEIIGVNTVQEALQIGVSR
NT seq 1374 nt   +upstreamnt  +downstreamnt
ttggcgaagcgtaaaacgaaatttgtttgtcaggattgtgggtatgaagtagcaaaatgg
cttggcaagtgtcctggttgtaataattggaatacgtttgtagaagagattgaaattact
ggtgggagacaaaagcaagcttttcaaacaggtaataggtcagtaggaaagcctgaaaaa
attacagcaattaaatcacaacaagaaccgagagtgacaacagatatgaaagagtttaac
cgtgtgctcggcggcggcattgtgccaggctctctcgttctagttggtggtgatccaggg
attggaaagtctaccctgttattacaaatatcatctcaattggcagataaaagtctgtct
gttttatacatttccggggaagaatcaacgagacagacaaagttgcgtgctgatcgttta
ggtgtaacttccgacgagttatatgtgttagcagaaacaaatttacttgatatagcaaat
caaatcgaagcaataaaaccatcatttgtcgttattgattccattcaaacggtctatcgt
gaagagattactagtgcaccgggcagtgtttctcaagtaagagaatgtacatctgaattg
atgaaaattgctaaaacgaatggaatacccatctttattgtgggacacgtgacgaaagag
gggacgattgctggcccaaggcttttagagcatatggtggacgctgtgctatattttgaa
ggggagcgtcatcatacgtaccgcattttaagaggtgtgaaaaatcggtttggtagtacg
aatgaaatgggcatctttgagatgaaggaagcggggctacgcgaagttttaaacccttca
gaaatatttttggaagaacgttcacaaggagcttcggggtctaccgtcgtagcttctatg
gagggaacaagaccagtattggtagagatacaggcattaatttctcctacagcgtttggt
aaccctcgtagaatggcgacaggagtagatcagaaccgtgttccactactgatggcagtg
ttagaaaaacgtgtcggtttaatgctgcaaaaccaagatgcatatattaaagttgctggt
ggtgttagacttgatgaacctgccattgatttagcaattgctgttagtattgcttctagc
ttccgtgatcaaccaacaaagccggaagatatttttattggggaagtcggactgacggga
gaaataagacgggtatctcgcattgaacaacgtgttcaagaagctgccaaactaggattt
aaacgcgttatttgtcctaaaaataatttggggggttggacaacgccaaataacatcgaa
attatcggtgtaaacacggtgcaagaagcgttacaaatcggggtaagtagataa

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