Virgibacillus dokdonensis: A21D_01468
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Entry
A21D_01468 CDS
T05261
Symbol
recF
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A21D_01468 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpn03400
]
A21D_01468 (recF)
DNA repair and recombination proteins [BR:
vpn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A21D_01468 (recF)
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
AAA_27
DUF2813
nSTAND3
AAA_29
ABC_ATPase
Sec20
Motif
Other DBs
NCBI-ProteinID:
AUJ24549
UniProt:
A0A2K9IXS2
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Position
complement(1550985..1552097)
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AA seq
370 aa
AA seq
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MHIQQLQLKNYRNYECLDMTFDHAINVIIGENAQGKTNLMEAIYLLAFTKSHRTPREKEL
VKWEEEYAKIEGRVTKRNQSFPLEIVISAKGKKAKLNRMEQKKLSDYIGAFNVVMFAPED
LTLVKGAPQVRRRFMDMELGQIQPRYIYHLGQFQKILKQRNHVLKQLQRQSTQDRTMLYV
LTDQLIEHAATLLERRFVFLTLLRKWASPIHYGISRQLETLHIAYAPTIDVSEEANKGKI
ADIYNRKFSEIEDKEIDRGTTLIGPHRDDLLFYVNDKNVQIYGSQGQQRTTALAVKLAEI
ELIYNEVGEYPILLLDDVLSELDDYRQSHLLETIQGKVQTFVSTTSVDGIQHETLNQAAI
FRVKDGKVES
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcatatacaacaactccaattaaaaaattatcgcaattatgaatgcctagatatgact
tttgatcatgcaattaatgtgattataggtgaaaatgcacaagggaagacaaatttaatg
gaggctatttacctattagcgtttacgaagtcccaccgcacccccagggaaaaggaacta
gttaaatgggaagaagagtatgctaaaatagaaggtagagtaaccaaacgaaatcagtct
tttccgcttgaaattgtcatttccgcaaaggggaaaaaggcaaaattaaatcgcatggag
caaaagaaattaagtgactacattggagcctttaatgtcgtaatgtttgctccagaggat
ttaacacttgtaaaaggtgcaccacaagttcgcagacggtttatggacatggaactaggt
caaatccaaccgcgctatatttatcatctaggccagtttcaaaagattcttaaacagcgg
aatcacgtattaaagcaattacaacgacaatctacccaagatcgaacgatgttgtacgtt
ttaaccgatcagcttattgaacatgccgcaactttattagaaaggcggtttgtttttttg
actttgctaagaaaatgggctagtccaattcattatggtataagccgtcagttagaaaca
ttgcatattgcttacgccccgacaatagacgtatcagaagaagctaataagggaaaaata
gcagatatatataatcgtaaatttagcgaaattgaagataaagagatcgatcggggaaca
acgttaattggtccccatcgagatgatttattattttatgtaaatgataaaaatgtacaa
atttacggttcacaaggtcaacaacgtacgacagctttagcggttaaattggcggaaatt
gaattaatttataacgaagtcggggaatatccgatcttactgctagatgacgtcttaagc
gaattagatgattaccgacagtcccatttattagaaactattcaaggaaaggtgcaaacc
tttgtctccacaacaagtgtagatggtattcagcatgaaacattaaaccaagcagccatt
tttcgggtgaaggatggaaaagtagaatcttaa
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