Virgibacillus dokdonensis: A21D_03773
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Entry
A21D_03773 CDS
T05261
Symbol
cfiB_2
Name
(GenBank) 2-oxoglutarate carboxylase small subunit
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn00020
Citrate cycle (TCA cycle)
vpn00620
Pyruvate metabolism
vpn01100
Metabolic pathways
vpn01120
Microbial metabolism in diverse environments
vpn01200
Carbon metabolism
vpn01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
A21D_03773 (cfiB_2)
00620 Pyruvate metabolism
A21D_03773 (cfiB_2)
Enzymes [BR:
vpn01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
A21D_03773 (cfiB_2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PYC_OADA
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
HMGL-like
Biotin_lipoyl
ATP-grasp
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp_3
ATPgrasp_ST
HlyD_3
RnfC_N
ATP-grasp_4
GCV_H
ATPgrasp_Ter
Motif
Other DBs
NCBI-ProteinID:
AUJ26807
UniProt:
A0A2K9J4F0
LinkDB
All DBs
Position
complement(4019015..4022458)
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AA seq
1147 aa
AA seq
DB search
MAQLKQINKVLVANRGEIAIRVFRACTELNIRTVAIYSKEDLSSYHRYKADEAYLIGEGK
KPIDAYLDIEGIIQLAKQVGVDAIHPGYGFLSENINFAKRCEEEGIIFIGPTSNHLDMFG
DKVKARYQATQAGLPVIPGSGGPVNSLEEVEQFARDHGFPIIIKATLGGGGRGMRIVRSK
QGLAEAYDRAKSEARAAFGNDEIYLEKLIENPKHIEVQIIGDQHENIIHLYERDCSVQRR
HQKLVEVAPSISLPEELRMKICEAAVKLMKNVNYLNAGTVEFLVTEDEFFFIEVNPRVQV
EHTITEMITGVDIVQTQIKVAEGRSLHEDSIGIPDQDKIVTTGYAIQSRVTTEDPLNNFM
PDTGRIMAYRSGGGFGVRLDAGNGFQGSVISPHYDSLLVKVSTWALNFNQAAQKMVRNLK
EFRIRGIKTNIPFLQNVILHKNFLNGVYDTTFVDNTPELFVFPKRKDRGTKMLTYIGNTT
VNGVDKDGNKEKPVFDDLKLPDVNTSNPIASGTKQILDKHGPDELAKWLKEQKEVLLTDT
TFRDAHQSLLATRVRTKDLHRIAEPTARLLPNLFSVEMWGGATFDVAYRFLKEDPWDRLL
KLRASMPNVLLQMLLRASNAVGYKNYPDNVIKEFVEKSATAGIDVFRIFDSLNWVEGMQL
AIEEVRNNNKIAEATMCYTGNILDTGRTKYDISYYKNLAKDLKASGAHILGIKDMAGLLK
PEAAYQLVSTLKETVDLPIHLHTHDTSGNGIYLYARAIDAGVDAVDVAAGPMAGLTSQPS
AQTLYHALEGHERQPKVNVNAYEKLSYYWEGIREYYRDFESGMKAPHTEIYMHEMPGGQY
SNLKQQAKAVGLEDRWNEVKTMFRQVNDMFGDIVKVTPSSKVIGDMTLFMVQNNLTEDDV
YERGETIDFPDSVIEFAQGYIGQPYQGFPPELQRIILKGKDPIKTRPGELLEPVDFTQLK
ETLFKTLDRQVTSFDLISHALYPKVFMEYHKFHDKYGDVSVLDTPTFFYGMRLGETVEVE
IEQGKTLIVKLVSISEPREDGTRVVYFELNGQTREIVVKDQSIQSEVEMRPKVDKSNEKH
IGATMPGTVIKVLCQSGDRVNKGDHLLINEAMKMETTVQAPFTGVIKQVNVKDGDSIAVD
DLLIELE
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacttaaacaaatcaacaaagtattagttgccaatcgaggagaaattgcaatt
cgtgtttttcgggcatgtaccgaattaaatattcgtactgttgcaatctattccaaagaa
gatttaagttcctatcaccgttataaagcggacgaggcgtatttaattggagaaggaaag
aagccaattgatgcatatctggatattgaaggtattatccagttagctaagcaagtaggt
gtagatgccattcatcctggctatggattcttatctgaaaatattaactttgctaagcga
tgtgaagaggaaggaattattttcatcggtccaacaagtaatcatttagatatgtttggg
gacaaagtaaaagctcggtaccaagctacacaggcaggtttacctgttataccaggaagc
ggtggcccggtcaactctttggaagaggtggagcagtttgcgagggatcatggttttcca
atcattattaaagccactctaggcggtggaggacgaggtatgcgtatcgttcgaagtaag
caggggcttgcggaggcgtacgatcgtgctaagtctgaggctagggctgcatttggtaat
gatgaaatttacttagaaaaactcattgaaaacccaaaacatattgaagttcaaattatt
ggagatcaacatgagaatatcattcatttgtatgaaagagactgctctgtgcagcgaaga
catcaaaaattagtagaggttgctccaagtatatctttgcctgaagaattgcgtatgaaa
atatgtgaagctgcggtcaaactaatgaaaaatgttaactatttaaacgctggtactgta
gagtttttagtgactgaggatgaattcttctttattgaagtaaacccaagggttcaagta
gagcatacgattactgaaatgattactggtgttgacattgtccagacgcaaattaaagtc
gctgaaggaaggagtttacatgaggattccattggtattccagatcaggataaaattgtt
actactggatatgctatccaatcgcgtgtaacgacagaagatccgctgaataacttcatg
ccagatactggaaggattatggcttaccgatctggtggtggatttggtgtccgattagat
gcggggaatggatttcaaggttctgttatttcaccgcactatgattcattgttagttaaa
gtgtctacttgggcgttaaattttaatcaagctgcacaaaaaatggtcagaaacttaaaa
gaatttcgtatacgtggtataaaaacaaacattccatttttacaaaatgttattttacac
aaaaatttcttaaatggggtctatgatacaacatttgttgataacacacctgaattattt
gtatttccaaaacgaaaagatcgtggaacgaaaatgctaacatatattggaaatacgaca
gtaaatggtgttgataaagatggaaataaagaaaaacctgtttttgatgatttaaagctt
cccgatgttaatacatctaacccaatagcttcaggtacaaagcaaattttagataaacat
ggtcctgatgagttagcaaagtggttaaaagaacaaaaagaagtgttgttaaccgacaca
acgtttcgtgatgcacaccaatctttattagcgacgagagttcgtacgaaggatttgcat
cgtatcgcggaacctaccgctagattgcttccaaacttattttcagtcgaaatgtgggga
ggagccacatttgacgtagcttaccgctttttaaaagaagacccatgggatcgcttgtta
aagcttcgtgcaagtatgccaaatgtattgttacaaatgctgcttcgtgcaagtaatgcg
gtaggttataagaattacccagataatgtaattaaagaatttgtggagaaaagcgcaaca
gccggcattgatgtgttccgaatttttgacagtctaaactgggtagaaggcatgcaatta
gcaatagaagaagtacgcaacaataataaaattgcagaagctactatgtgttatacaggc
aatattttagatactggacgaacaaagtatgatattagctattataaaaatttagctaaa
gatttaaaagcgtcaggagcgcatattctcggtattaaggatatggcaggattattaaaa
ccggaagcggcatatcaattggtgtctacattaaaagagacggttgacttaccaattcat
ctgcatacacacgacaccagtggaaatggaatttatttatatgcccgagctatcgatgcc
ggagtagacgctgtagatgttgcagccggaccaatggctggtctaacttctcaacctagt
gcacagactttatatcacgcattagaagggcatgaacgtcaaccaaaagtgaatgtaaat
gcgtatgaaaagctttcttattattgggaaggtatacgtgaatactaccgtgattttgaa
agtggaatgaaggcaccacatactgaaatttatatgcatgaaatgcctggaggtcagtat
agtaatttgaagcaacaagccaaagctgtagggcttgaagatcgttggaatgaagtgaaa
acaatgtttcgacaagtgaatgatatgtttggtgatattgttaaagttaccccttcgtca
aaagtgattggtgatatgactttatttatggtacaaaataatttgacagaagatgatgtt
tatgaacgtggagaaacgattgactttccggattctgtaatagaatttgcacaaggctac
attggacagccttatcagggttttccaccagaattgcaacgaatcattttgaaaggaaag
gaccctatcaaaacacgtccaggtgaattgctagaaccagttgactttacgcagctaaag
gaaacattgtttaagaccttagaccgacaagtaactagctttgatttaatatctcacgct
ctttaccctaaagtttttatggaatatcataaattccatgacaaatacggcgatgtaagt
gtattggatactccgactttcttctatgggatgaggcttggagaaacggttgaagtagaa
attgaacaagggaaaacattaattgtaaaacttgtttctatttcagaacctagagaagat
ggtacgcgtgttgtatattttgaattgaatgggcaaacgagagagattgttgtgaaagat
caaagcattcaatctgaagttgagatgaggccaaaagtagataaaagtaatgaaaaacac
attggtgctacaatgccagggacagtaataaaagttctttgtcaatcaggggatcgtgtt
aataagggagaccatttattgattaatgaagctatgaaaatggaaacaactgtccaagct
ccatttacaggagttattaagcaagtgaatgtaaaagatggcgatagtatcgctgtagat
gatctacttattgaattagaataa
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