Vespula pensylvanica (western yellowjacket): 122633642
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Entry
122633642 CDS
T07720
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122633642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vps03019
]
122633642
Messenger RNA biogenesis [BR:
vps03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
122633642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
RNase_H_2
Motif
Other DBs
NCBI-GeneID:
122633642
NCBI-ProteinID:
XP_043677697
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All DBs
Position
12:complement(3076396..3080370)
Genome browser
AA seq
895 aa
AA seq
DB search
METTENWDDNNEIFIIDNERKKKENIEDKQVIAGFATFDDYLKEVFDAIREGIKAANNLP
TGENFNYYECFPSFNKARKEDSERLLKMMQKIIKLSGVSGNIERRDIEEKFELLLEANDV
FLDKAGLCMDEECGILKNPEIELVVSQTKKDVTGSWNLISSTNSKRLSDKSKTAQAVRLL
TARNIQRPQLTFKDKIDNSLKPWEPKIKDKPNSLKPLAIYLEETEDGEVFCHPYEFELNK
FQPPENQLQKEEPVKYKELHETPLIMINKPEDIKILLNDLKKYQEIAVDLEHHSYRSFQG
ITCLMQISTSDTDYIIDTLTLRSELHELNEIFTKSTILKVFHGAEFDIQWLQRDLSIYVV
NMFDTHQAAKQLNLPYLSLAYLLKRFCNVDPNKHFQLADWRIRPLPDELLKYAREDTHYL
LHIKDILRNTLIDSSNGKTNILKAVYDRSTEICKLTYIKPIWTEESYTDMYRKSQKLFNN
KQIYALKELHKWRDMTAREEDDSTGYVLPNHMLLNIAETLPREMQGILACCNPIPPLLRQ
NLLKLHKIILKARDQSSIKPVKENDIRQRFVRENHAINSEAWAYSPHDIPSGTEVRTDLP
CLLDESNQLEIEVPNCNINVKHNITVFDSPNSSEGEQSTSNEMEQNRKKKFIFISPFERY
KRAMPVVAEQEKQDRQKQDEEEEKRLNKLKIKDASSSIFKTGQKSLSDQTTSDQSSSLKK
KQNFSIPLKQMPGRKRKRDSSVKDSSDERSDSNLSTPIPSLNKKIMQGVNKELLTTKDTT
NEQNKQLTVQTVSYDQNLAVKPLRERKKGEKKANAKELRQKGMLPVETFDYKSVDFNNTF
QGGSITNDGANQANFVEPKELYRSIKRCNEESIIFTVYVYMVLSCFMMMMICLNS
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaacagaaaattgggatgataataatgagatatttataattgacaatgaaaga
aaaaaaaaagaaaatatcgaagataaacaagttatagcaggttttgctacgttcgatgat
tatcttaaggaagtgtttgatgctattagagaaggaatcaaagcagcaaataatttaccc
actggagagaattttaattactatgaatgttttccaagttttaataaagcaagaaaggaa
gattcggagaggctattaaaaatgatgcaaaaaataattaaactatcaggagtgagcggt
aatatagaaagacgcgatatagaagagaagtttgaacttttattggaagcaaatgatgtg
tttctagataaggcaggtttatgtatggatgaagaatgtggcattttaaaaaatcctgaa
atagaattagttgtatcacaaactaagaaggatgttactggtagttggaatctaatatca
tctacaaacagcaaacgattatcggacaagtctaaaactgcacaagcagtgcgtctcttg
actgcacgaaatatacaaagaccacaattaactttcaaggacaaaattgataacagttta
aaaccttgggaacctaaaattaaagataagccaaattctttaaaaccattagctatttat
ttagaagaaactgaagatggagaagtattttgtcatccttatgaatttgaactgaataag
ttccaacctccagaaaatcaattacaaaaagaagaacctgttaaatataaagaattacat
gaaactccattaataatgataaataaaccagaagatatcaaaattttattaaatgattta
aaaaaatatcaagagattgctgtggatttggaacatcattcttatagaagttttcaaggt
ataacttgtttgatgcaaatatcaactagtgatactgattacataattgatacattaaca
ttaagatcagaattacatgagctgaatgaaatttttacgaaatctactattctaaaagtg
ttccacggagcagaatttgatattcaatggcttcaaagagatctatctatatatgtagta
aacatgtttgatactcatcaagctgctaagcaactaaatttaccatatttaagtttagct
tatcttttgaaacgattttgtaacgtagatccaaacaaacattttcaactagctgattgg
cgtataagacctttacctgatgaacttttaaaatatgcaagagaagatacacattattta
ttgcatattaaagatattttaaggaatacattaattgattcttcaaatggaaagactaac
attttaaaagctgtatatgatagaagtacagagatatgtaaattaacttatataaagcca
atatggacagaagaaagttatacggatatgtataggaaaagtcaaaaattatttaataat
aaacaaatttatgctttgaaagaattacataaatggagagacatgacagctagagaagaa
gacgatagcactggttatgttttaccaaatcatatgctcttaaacatagccgagacatta
ccacgtgaaatgcaaggtattttagcttgctgtaatccaattccaccattgcttcgtcaa
aatctattaaaacttcataagatcatacttaaagcacgagatcaatcttcaataaaacca
gtaaaagaaaatgatattagacaacgatttgttcgagaaaaccatgcaataaactcagaa
gcttgggcttattctcctcatgacataccaagtggtacagaagttagaactgatttgcct
tgtctgttagatgaatcaaatcaattagaaatagaagtaccaaattgcaatattaatgta
aaacataacattacagtatttgatagcccaaattcatctgagggtgaacaatcaacttct
aatgaaatggaacaaaatagaaagaaaaaattcatatttatcagtccctttgaaagatac
aaacgtgcaatgcctgtggtagctgaacaagaaaaacaagataggcaaaaacaagatgaa
gaagaagaaaaaagattaaataaattgaaaatcaaagatgcatcttcatctatattcaag
actggtcagaaatctctttctgatcaaactacatcagatcaaagttcaagtcttaaaaaa
aaacaaaacttctctattccactaaaacaaatgcctggaagaaaaagaaaacgagattca
tctgtgaaagattcatcagatgaaaggtctgatagtaatttgtctacaccaattccatct
ttaaacaaaaagataatgcaaggtgtaaacaaagaattacttacgaccaaagatacaacg
aatgaacagaataaacaattaactgtacaaaccgtttcatatgatcaaaatttagctgtt
aaacctttaagggaacgtaaaaaaggagagaaaaaggcaaatgcaaaagaattaagacaa
aaaggaatgcttcctgtagaaacatttgattataaatctgttgactttaataacactttc
caaggtggtagtatcactaatgatggagcaaatcaagcaaactttgtggaaccaaaagaa
ttatatagatcgatcaaacgatgtaacgaagaaagtattatatttactgtttatgtttat
atggtattatcttgctttatgatgatgatgatttgtctaaattcataa
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