Virgibacillus pantothenticus: KBP50_16390
Help
Entry
KBP50_16390 CDS
T07430
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vpt
Virgibacillus pantothenticus
Pathway
vpt03420
Nucleotide excision repair
vpt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KBP50_16390
03430 Mismatch repair
KBP50_16390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpt03400
]
KBP50_16390
Enzymes [BR:
vpt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KBP50_16390
DNA repair and recombination proteins [BR:
vpt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KBP50_16390
MMR (mismatch excision repair)
Other MMR factors
KBP50_16390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_30
DEAD
SLFN-g3_helicase
NACHT
Vmethyltransf
Motif
Other DBs
NCBI-ProteinID:
QTY18583
LinkDB
All DBs
Position
complement(3563657..3565948)
Genome browser
AA seq
763 aa
AA seq
DB search
MHQDFPYEQRRVDHIHEEIKQKELKIAAKTSHLKQDVIELRKTFWDDVTVNLDEPDDVIE
TEASIKQQAELLTQKETIHGSLAKELRTLNRLKDNPYFGRIDFTEDGEEKESIYIGIASL
MDSAEDNFLIYDWRAPISSLYYDYALGSASYQTLDGDVSGEISLKRQFIIRNGVIKAMFD
TGLTIGDQLLQEALGNNASTTMKSIVATIQKEQNKIIRNEKSKLLVVQGVAGSGKTSAAL
QRIAYLMYRYRKQLNPENVMLFSPNPLFSSYIRNVLPELGEENVRQTTFYYFVEEKTGEE
FSIESPFTQMEYMLTNKGTTDGQIRMQGIAYKSSLAFKEVIDNYVACLYISGVCFKPVVF
RNQVIISNEAIANYFYSLDSSVSLFNRMELVANWLLKELALIQKREVSKDWVEEKIELLD
KEAYAKAYYKAQKQAAGSVVDEEMILRKAVVSKMFARIKKRIKQYAFVDVPKTFAQLFKH
QEQQKDLPTEWNDIAAQTIKNIQSNILGWEDAAPYAYFKGKLLGDMADRSVRYLVIDEAQ
DFSAFQFAYIKELFPHTRMTLLGDVNQAIYNPISKQNPLLLDEKNDVERITLTKSYRPTK
QLVQFTRHFAPGKDVIEPFEREGNKPKLVDVKEENQLVEVLINEVQELFQKGYETIALVT
KSIQESKQLYKTLKGKIDCILVDEETYTFTKGILIIPVYLAKGIEFDAVVIPDATNKHYT
KEDQILFYTACTRAMHELSIMVTGEPTAFIKETPKNTYQMTEI
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaggattttccttatgaacaacgacgtgtagaccatattcacgaggaaataaag
caaaaagagttaaaaatagcggctaaaacatcgcacttgaaacaagacgtcattgaattg
cgaaaaacgttttgggatgacgtgactgtaaatttggatgagcctgacgatgtgattgaa
acagaagcaagcattaaacagcaagcagagttattgacgcaaaaagaaaccattcatggc
agtttagcgaaagaattaaggacattaaatagacttaaagacaatccttattttggtcga
attgattttacagaagatggtgaagaaaaagagtctatttatattggcattgcttcgtta
atggatagcgccgaagataattttcttatctatgattggagagccccaatatcaagtctt
tactatgactatgcattaggcagtgcgagctatcaaacgttagatggagacgtctctgga
gaaatatcgttgaagcgacaatttattattcgtaatggagtaataaaagcaatgtttgat
acaggacttacaattggtgatcaattgctacaagaagctctaggtaataatgcaagtacg
acgatgaaaagtattgtcgcaacgattcaaaaagagcagaataaaatcattcgtaacgaa
aagagcaaattattagtagtgcaaggggtagcgggtagtgggaaaacttctgccgcatta
caaaggatcgcttatttgatgtatcgttatcggaagcaattaaatccggaaaatgtcatg
ctattttcgccaaatcctttattttcaagctatatccgtaatgtgttacctgaacttggt
gaggagaatgtaagacaaactactttttactactttgtggaagaaaaaacaggagaagaa
ttttcaattgaatccccttttacacaaatggagtatatgctgacaaataaaggaacaaca
gatggtcaaattcgtatgcaagggattgcctataaatcttcgctcgcatttaaggaagtg
atcgataattatgttgcttgtttatatatttccggggtttgttttaaacctgttgtgttt
cgcaaccaagttattatttcgaacgaggcaatcgctaattatttttactcgttggattct
tccgtttctttattcaatcggatggaactagtcgcaaactggctgttgaaggaactagct
ttgattcaaaagcgggaagtttcgaaggattgggtagaagaaaaaatagaattgttggat
aaagaagcctatgcgaaggcgtattataaggcacaaaagcaagctgctggaagcgtagtg
gacgaagagatgattttaagaaaagccgttgtgagtaaaatgtttgctcgtatcaagaag
cgaataaaacagtatgcgtttgtcgatgttccaaaaacatttgcacaattgtttaagcat
caggaacaacaaaaggatctgccaacggaatggaatgatattgctgcacaaacgataaaa
aatattcagtccaatatcttggggtgggaagacgcagcgccatatgcgtactttaaaggc
aaactgcttggagatatggcggatcgttccgtgcgctatttagtaatagatgaggcacag
gatttttccgcttttcaatttgcctatattaaggagttgtttccacatacgagaatgacg
ctattaggggatgtgaatcaagctatttataatcccatatctaaacaaaatccattactt
ttagatgaaaaaaatgatgtggagcgaattacattaacgaaaagctatcgtcctacgaaa
cagcttgtccaatttacaaggcatttcgcccctggtaaagatgttattgagccgtttgaa
cgagaaggaaacaaaccaaagcttgttgatgtaaaagaagaaaatcagcttgtagaagtg
ctaattaatgaggtacaagaactgtttcaaaaaggatatgaaacgatagcgctcgttacg
aaatcgatacaggaaagtaaacaattatataagacattaaaaggaaagatagattgtata
ttagttgatgaagagacatacacgtttacaaaagggattttaatcattccggtgtattta
gcaaaaggcattgaatttgatgcggtagttattccagatgcaacaaacaagcattataca
aaggaagatcaaatcttattttatacagcttgtacgcgagcaatgcatgaattatcgata
atggttacaggtgagccaaccgcctttataaaggaaacgcctaaaaacacgtatcaaatg
accgagatttag
DBGET
integrated database retrieval system
