Vibrio qinghaiensis: CCZ37_00015
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Entry
CCZ37_00015 CDS
T05259
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
vqi
Vibrio qinghaiensis
Pathway
vqi03030
DNA replication
vqi03430
Mismatch repair
vqi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCZ37_00015
03430 Mismatch repair
CCZ37_00015
03440 Homologous recombination
CCZ37_00015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vqi03032
]
CCZ37_00015
03400 DNA repair and recombination proteins [BR:
vqi03400
]
CCZ37_00015
Enzymes [BR:
vqi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CCZ37_00015
DNA replication proteins [BR:
vqi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CCZ37_00015
DNA repair and recombination proteins [BR:
vqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CCZ37_00015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
SLS
Motif
Other DBs
NCBI-ProteinID:
ASU21129
UniProt:
A0A223MU97
LinkDB
All DBs
Position
1:2477..3577
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AA seq
366 aa
AA seq
DB search
MKFTIERSHFIKPLQQVSGTLGGRATLPILGNLLLKVEENVLSMTATDLEVELISRVTLE
GECEAGSITVPARKFLDICRGLPDSAVITVVLEGDRIQMRSGRSRFSLATLPASDFPNIE
DWQSEVEVSLTQAELRSLIEKTQFSMANQDVRYYLNGMLFEIDGSTLRSVATDGHRMAVS
QTALSADFANKQIIVPRKGVQELVKLLDAPEQPVVLQIGSSNLRAQVNNFIFTSKLVDGR
FPDYRRVMPQQTTKTLETGCDELRQAFSRAAILSNEKFRGVRVNLANNAMRITANNPEQE
EAEELLDVTFEGDAIEIGFNVSYVLDVLNTLRCEQVRVSMSDANASALIENRDDDSAMYV
VMPIRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttactattgaacgtagccacttcattaagccacttcagcaagtatctggaaca
ttaggcggacgtgcgactttgccaattcttggtaatttgttgctcaaagtggaagagaac
gtgctgtcgatgacggcgaccgatcttgaagtcgaactgattagccgcgtgacacttgaa
ggtgagtgcgaagcaggaagcatcactgtccctgcgcgtaaatttttagatatttgtcgc
ggcttgcccgatagcgccgtgatcactgtggtattggaaggcgatcgcatccagatgcgt
tctggccgtagccgtttctctctggcaaccttacctgccagtgactttcctaatattgaa
gattggcaaagtgaagtggaagtgtcgctcactcaggcagaactgcgtagtttaattgag
aaaacccagttttcgatggctaaccaagatgtgcgttattacctgaacggtatgctattt
gaaatcgacggttcaaccttgcgctctgtggcaaccgatggacaccgtatggcggtttcg
caaacggcactcagcgcggattttgccaataaacagatcatcgtgccgcgtaaaggggta
caggaactggtcaagttacttgatgcgccagaacagccggttgtgctgcaaattggtagc
tcaaatttgcgcgcccaagtgaataatttcatcttcacttctaagctggttgatggccgc
ttccctgattatcgccgcgttatgccgcagcaaaccaccaaaaccttagaaacgggctgt
gatgagttacgtcaggcgttttctcgtgctgcaattctctcaaatgaaaagtttcgcggt
gtacgggttaatcttgcgaataacgcaatgcgcattaccgccaataacccagagcaagaa
gaagcggaagagttgttggatgttacctttgagggcgacgccatcgaaattggttttaac
gtcagctatgtactcgatgtactgaatacattacgttgtgaacaggttcgtgtatcgatg
tctgacgccaacgccagcgcgctgattgaaaatcgcgatgacgatagtgcgatgtatgtc
gtcatgccgatccgactttaa
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