Vibrio qinghaiensis: CCZ37_05360
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Entry
CCZ37_05360 CDS
T05259
Name
(GenBank) type I secretion system permease/ATPase
KO
K12530
ATP-binding cassette, subfamily B, bacterial RtxB
Organism
vqi
Vibrio qinghaiensis
Pathway
vqi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vqi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CCZ37_05360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vqi02000
]
CCZ37_05360
02044 Secretion system [BR:
vqi02044
]
CCZ37_05360
Transporters [BR:
vqi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CCZ37_05360
Secretion system [BR:
vqi02044
]
Type I secretion system
RTX toxin transporter
CCZ37_05360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
DUF87
ABC_ATPase
Zeta_toxin
DUF6338
AAA_29
AAA_18
nSTAND3
AAA_24
AAA_5
RsgA_GTPase
PRK
Mg_chelatase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ASU22048
UniProt:
A0A223MWU9
LinkDB
All DBs
Position
1:complement(1147742..1149850)
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AA seq
702 aa
AA seq
DB search
MTDLNEKKAMLHCLSVYLPLIGIREIKLDTSNKTPSNALDSIIKDLKGKNYLVTANKVKS
FSGITKIKKPIILFNKNNHPFILAKVEQDKCLIHPCDSDTPKVVDASYLKQNWNGKTLDI
KKKQSSFDIRWFLPELSQHKHLIAEIVLFSFVLQVIALITPLFFQVVMDKVLVHQAHSTL
DVLVFVLVISGIAEVLLRGLREYQYAHTANRIDIKLGIKLVHHLFGLPLLFFKSRQVGAI
VTRVRELDTIREFITGSMFTLTIDLVFLVIFFYVMSLLSGGLTLLVLATLPCYLFLAWWL
TPRLQQAIEQQFTHMAHNTSFLTETVAGSDTIKSLATEPRFIRRWDTQTEQMISSNYVVQ
QWNNRSSHAVQFIQKIASVFLLWIGASEVLALQMTIGQLIAFNMLAGHVAQTLARLVELW
GQFIQAQIAVDKLSDLLNLPTEQQQASHPLQLRGAITLSKVNFRYQPDLPLTINRLSLNI
QAGEKIGVVGGSGSGKSTLARLLLKLYSPESGQIMFDNTSLKQIGVHELRRQLGVVSQEN
FLFSKSVSDNIAHSKPQANLDEIVQAAKLAGAHEFILKLPLGYDTILAEGGQSLSGGQRQ
RLAIARTLLADPKILILDEATSALDDESQAIIQTNMEQIAAGRTVITIAHRLSTVRECDR
IIVLEKGEIAEQGTHLQLLAEQGKYFQLWQLQQALKQEDERA
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgactgatttaaatgaaaaaaaagccatgctgcattgcttatcagtctacttaccgctg
atcggaattcgtgaaataaaattagacacctctaataaaacaccatccaatgcacttgat
tcaataataaaagatctaaaagggaaaaattatttagttactgctaataaagtaaaatct
ttttctggcattactaaaataaagaaaccgatcattttatttaacaaaaataatcaccca
tttattttagctaaagttgaacaggataaatgtttaattcatccatgcgattcagacacc
ccaaaagtagtagatgcaagctatttaaaacagaattggaatggaaaaacgctagatatc
aaaaaaaagcaatcctcttttgatattcgttggttcttacctgaattatcgcaacataaa
catttaatcgcagagattgttttattctctttcgtactgcaagttattgcacttattaca
ccgctatttttccaagtcgtgatggacaaagtattagtgcatcaagcccactcgacactc
gatgttttagtgttcgtcttagttatttctggaatagcagaggtcttactgcgcggtttg
cgcgaatatcaatatgctcatactgctaaccgcattgatattaagcttggcattaaattg
gttcaccatctgtttggtttgccgctgctgtttttcaaatcaaggcaagttggggcgatt
gtgactcgagtaagagagctcgataccattcgtgagttcatcacaggttcgatgtttacc
cttacgattgatctcgtttttctcgtgatctttttctatgtgatgagcttactttctggc
gggctaaccttattggtattagccacactgccgtgttatctctttttggcttggtggtta
accccaaggctgcaacaagcgattgaacaacaatttacccatatggcgcacaacacttcg
tttctaactgaaaccgtcgcggggagtgataccattaaaagcttagcgactgaacctcgc
tttattcgacgttgggatactcaaaccgaacagatgatatcgagcaactatgtggttcag
cagtggaataaccgctctagccacgcagtgcagttcatccaaaaaatagcgagcgtcttt
ctactatggattggcgcatccgaagtgctcgcgttacaaatgaccataggccaactgatc
gcttttaacatgctcgccggccatgttgcacaaactcttgcccggctcgtcgagctgtgg
ggacaatttatacaagcgcaaattgcagtcgataaactttccgacctactcaatttgccc
accgagcagcagcaagctagccatcccctacaactgcgaggtgcgatcactctcagtaaa
gtgaatttccgttatcaacccgatttaccgctgaccatcaatcggctttcactcaatatc
caagcgggtgagaaaattggtgtggtcggtggctcggggtcgggaaaaagcaccttggct
cggcttttactcaagctgtacagccctgaatcaggccaaatcatgttcgataacacttca
ctcaaacagatcggtgttcatgaattgcgtcgccagttgggggtggtatcacaagagaac
tttctctttagtaaaagtgttagtgacaacattgcccattcaaagccacaagccaacttg
gatgagattgtgcaagcagcaaaattagcgggcgctcatgagtttattttaaaactgcca
ctgggttacgacacgattttagctgaaggggggcagtcactttcaggcgggcaacgacaa
cgtttagccattgcccgcacactgcttgcagaccctaagattttgattcttgatgaagcc
accagcgctttagatgatgaatcacaagccatcattcaaaccaatatggagcaaattgcc
gctgggcgcaccgttattaccatcgcacaccgcctctctacggtaagagagtgtgaccga
attatcgtgctggaaaaaggcgagattgcagagcaaggcacacacctacaacttctcgca
gagcaaggcaaatatttccagctatggcaactgcaacaagcattaaaacaagaggatgag
cgagcatga
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