KEGG   Veillonella rodentium: 44547418_01180Help
Entry
44547418_01180    CDS       T05216                                 

Gene name
ddlB
Definition
(GenBank) D-alanine--D-alanine ligase B
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
vrm  Veillonella rodentium
Pathway
vrm00473  D-Alanine metabolism
vrm00550  Peptidoglycan biosynthesis
vrm01100  Metabolic pathways
vrm01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:vrm00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    44547418_01180 (ddlB)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    44547418_01180 (ddlB)
 09160 Human Diseases
  09168 Drug resistance
   01502 Vancomycin resistance
    44547418_01180 (ddlB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:vrm01011]
    44547418_01180 (ddlB)
Enzymes [BR:vrm01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     44547418_01180 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:vrm01011]
 Precursor biosynthesis
  Amino acid ligase
   44547418_01180 (ddlB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N GARS_A ATP-grasp_4 RimK CPSase_L_D2 ATP-grasp ATP-grasp_3 DUF4343 ATPgrasp_ST ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID: SNV68298
UniProt: A0A239ZC76
LinkDB All DBs
Position
1:complement(1260425..1261357)
Genome map
AA seq 310 aa AA seqDB search
MKDKQIIVLMGGPSKEADVSRRTGAAIAEALVSKGYKAKTLELNPRTLLQDIESLGGEIV
FNAIHGRYGEDGALQGLLEMAEIPYTGSGIMAHAVGMNKKVSKDVFKGAGIPTAAFESYN
GNIESDKAIIQHIRETFTIPVVVKSATQGSSIGVTIVRDETQLADAVTEALKYDPILVVE
QFLDGREFTVSILDGQALPVIEIRPHSGEYDYESKYTAGATDYLVPAPISDDMTAAMQSI
GERVYREVQGSGAIRVDIMTDHDDNLYVLEYNTIPGMTATSLVPKAAKEMGMDFPTLCEK
ILLTAGLGKF
NT seq 933 nt NT seq  +upstreamnt  +downstreamnt
atgaaagataaacaaataatcgtattgatgggcggaccttcaaaggaagcggatgtgtcc
agacgtacaggtgccgctattgcagaggctcttgttagtaaaggatataaagctaaaaca
ttggaattgaacccgcgtacattgttacaagacattgagtcattaggcggtgaaatcgta
tttaatgcgattcatggtcgttacggtgaggatggagctttacaggggttattggaaatg
gctgaaatcccgtataccggatccggcattatggctcatgcggtggggatgaataaaaaa
gtcagcaaggatgtatttaaaggggccggtattccgaccgcggctttcgaatcgtataat
ggtaatattgagtcagataaagccattattcaacatattcgtgagactttcaccatcccc
gtagtagtaaaatctgcaacgcaaggttcaagtatcggtgttaccattgttcgtgatgaa
actcagttggcggatgccgtaacggaagcccttaagtatgacccaattctcgtggtagaa
cagttcctggacggacgtgaatttaccgtttccatcctggatggtcaagctttaccggtc
attgaaattcgtccgcattccggtgaatatgattatgaaagtaagtatacggccggcgct
acagattatctcgtacctgcaccgatcagcgatgatatgacggctgcgatgcagagtatt
ggggaacgagtatatcgggaagtacaaggaagcggtgccatccgtgttgatatcatgacg
gatcatgatgataatttgtatgttttggaatacaatacgataccgggaatgacggcgaca
tccctggtaccaaaagcggctaaagaaatgggaatggattttcccacattatgtgaaaag
attctgctaacggccggtttggggaaattttaa

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