KEGG   Vibrio rotiferianus: BSZ04_11645
Entry
BSZ04_11645       CDS       T05115                                 
Name
(GenBank) exodeoxyribonuclease V subunit beta
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
vro  Vibrio rotiferianus
Pathway
vro03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vro00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BSZ04_11645
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vro03400]
    BSZ04_11645
Enzymes [BR:vro01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     BSZ04_11645
DNA repair and recombination proteins [BR:vro03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BSZ04_11645
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_25 SLFN-g3_helicase ResIII AAA_11
Other DBs
NCBI-ProteinID: ASI95647
LinkDB
Position
2:587436..591074
AA seq 1212 aa
MAQMSVPTPLQTMTFPLHGARLIEASAGTGKTFTIAGLYLRLLLGHGTTDTKHRVPLTVD
QILVVTFTEAATAELRDRIRARIHDARIAFARGKSSDPVIQPLLEEIEDHKQAAEILLQA
ERQMDEAAVYTIHGFCQRMLTQNAFESGSRFNNEFVTDESHLKAQVVADYWRRNFYPLPF
ALAGEVRQLWGSPSDLLYDISNYLTGAPLSLSVPAMQGSLADLHEQNLKQIDALKGQWRD
SQEDFLALIADSDVNKRSYTKKSLPTWLEAVNAWAATETTGYDYPDKLEKFAQNVLFEKT
PKGTAPQHPVFEAIEAFLANPISLKAPLLAHAIEHCRVMLAKAKNQKQWLSFDDLLTQLS
ASIDTDETAILTERIRTLYPVAMIDEFQDTDPLQYSIFSRIYLDNPECGLFMIGDPKQAI
YGFRGADIFTYIKARNQVSAHYTLGTNWRSSADMVLAVNQIFALPDSPFIYDSDIPFHPV
DYSPSADKRVWTIGGQKQPALTYWLQETEDKPLPKGEYLTAMAEATASQIQTILTAAQQG
EACLVNGEKQKPVKAGDIAVLVRTGSEGRMVKQALADQGIASVYLSNRDSVFTSSVAQDL
QRLLQAVLTPENDRALRASLASELFALDAASLDALNNDETVWENTVNEFKEYRKLWVQRG
VLPMLRAVISKRHIAERLLEEGSSSQSENGERVLTDLMHIGELLQQASNELDSDHGLLRW
LAQSISDAEHGLGGSDDQIQRLESERNLVQIVTIHKSKGLEYDLVFLPFVFGYREASEAK
YYDAENDRTVLDITGNDASLKQADNERLAEDLRLIYVALTRAVYACFIGASPLRNGRSTK
EPTGVHHSAIGYLVQNGQEGGINDLFVGLKKQQENLDNVMICDPPKQHDEIYVAEQTELE
ALTAKELQNPIDRNWRITSYSGLVKQGSHHAEHDATIEITGFDIDSSEEQDEAELVEPER
SIFNFPRGARPGTFLHSLFEEIEFTQPATTEENTQIILGLMESEQLDEEWLPILQQLIDT
VLATPLDSKALLLNQKGPAQRLVEMEFLLPIEVLSAPALNRVIQRHDPLSAKAGDLGFQT
VQGMLKGFIDLVFEYQGKYYVLDWKSNHLGDDVFHYHGDALKSAMADHRYDLQYQIYALA
LHRFLRSRLPNYDYEQHFGGVYYLFLRGMDGQSDHGIFSAKPTFEFLQEMDHLIDGQAPD
TRSSESGQMELI
NT seq 3639 nt   +upstreamnt  +downstreamnt
atggcgcaaatgtcagttccaactccactgcaaaccatgacttttccactgcatggtgca
aggttaattgaagcatcggcaggtacgggtaaaacctttaccatcgcgggtttgtatctg
cgactcctactagggcatggcacgacagataccaaacaccgcgtgccgttgaccgtggat
caaattctggtggtgacctttaccgaagccgcaacggcggagctgcgtgatcgtattcgt
gcgcgtattcatgacgcgaggatcgcattcgctcgcgggaaaagctcagatcctgtgatt
cagcctttattggaagaaattgaggatcataagcaagccgccgagatccttttgcaagca
gagcgccaaatggatgaagccgcggtgtacaccattcacggtttctgccaacgcatgctg
acgcaaaacgcatttgaatctggtagtcgtttcaataatgagtttgtgacagacgaaagc
catcttaaagcgcaagtggttgccgattactggcgtcgtaacttctacccgctgccattc
gctttggcgggagaagtacgccaactatggggttcgccatcggatctgttgtatgacatt
agcaactacctcacgggtgcaccgctaagtctctctgtccctgcaatgcaaggtagcctt
gccgatttgcatgagcaaaacttaaagcaaattgatgctttgaaaggccagtggcgtgat
agccaagaggatttcctcgcactgattgctgattccgacgtcaacaagcgcagctacacc
aaaaagtctttaccgacgtggctagaagcggtcaacgcttgggctgcgacagaaaccacg
ggctatgactatccagataagttggagaagttcgcgcagaatgtgttatttgagaaaacg
ccgaaaggcactgcgccacagcacccagtgtttgaggcgattgaagcttttcttgccaac
ccaataagcttaaaagcgccattattagcgcatgcgattgagcattgtcgcgtgatgctg
gcaaaagcaaaaaatcagaagcaatggttgtcatttgatgacttgctgactcagctttct
gcctcgattgataccgatgaaaccgcaatactgacagagcgtatccgtacgctttatccg
gttgcgatgatcgacgaattccaagataccgacccactgcaatacagtatttttagccgc
atttatttagataacccagagtgcggtttgtttatgatcggtgatccgaagcaggcgatt
tacggtttccgtggggcggacatcttcacttacatcaaggctcgtaaccaagttagtgct
cactacacgcttggcaccaactggcgctcaagtgccgatatggtattggcagtgaaccag
atttttgctctgccagacagcccgtttatttatgactccgacattccattccaccccgtg
gattacagcccaagtgctgacaaacgcgtttggactataggtggtcaaaagcaacctgcg
ctgacttattggctgcaagaaacggaagataaacctctgccaaaaggcgaatacctcact
gctatggcagaggcgacagcaagccaaattcaaactattttgaccgcggcgcaacaaggc
gaagcgtgtttggtcaatggagaaaagcaaaagccagtcaaagcgggtgacattgcagtg
ttggtgcgaacgggtagcgaaggtcgcatggtcaaacaggcgttagcagaccaaggcatt
gctagtgtgtatttgtccaaccgcgatagcgtgtttaccagttccgtcgcacaagactta
cagcgtttgctgcaagcggtattaacgccagaaaacgacagagcattacgtgccagccta
gcatcagaattattcgctctggatgcggcaagtttagacgccctcaataacgacgaaacc
gtgtgggaaaatacggttaacgagttcaaagaataccgtaagctttgggtgcaacgtggt
gtgctacctatgctgcgtgcagtgatcagcaagcgtcatattgctgaacgtttgctagaa
gaagggtcgagttcacaaagcgaaaacggtgagcgagtacttaccgatctgatgcacatt
ggtgagctattgcagcaagcgagcaacgaattagacagcgaccacggcttgctgcgttgg
ttagcccaatccatcagcgatgcagaacatgggctaggtggcagcgatgaccaaattcag
cgtttggaatcagagcgtaacttggtgcaaatcgtcaccattcacaaatctaaaggcctg
gaatatgacttggtcttcttgccatttgtgtttggctaccgagaagcgagtgaagccaaa
tactacgacgctgagaacgatcgcaccgtacttgatatcacgggcaatgatgcgtcgtta
aaacaggcagataacgagcgccttgctgaagacttgcgcctcatctatgtagcgctaacg
cgtgccgtgtatgcctgctttattggtgcttcaccactacgcaatggtcgctcaaccaaa
gagccaactggcgtgcatcacagcgcaattggttacttggtgcaaaatggtcaagagggc
ggcattaacgatttgtttgttgggttgaagaagcaacaagagaatctcgataacgtcatg
atttgtgaccctccaaagcagcacgacgagatatatgttgcggagcaaaccgagttagaa
gcgttgactgccaaagagctgcaaaacccgattgatagaaactggcgcatcaccagttac
tcgggcttggttaagcaaggttctcatcatgctgaacatgacgcgacgattgaaatcacc
ggctttgatatcgattcttcagaagagcaagatgaggcggaattggttgagccagaacgc
tctatcttcaacttcccgcgcggcgcacgtccgggtacttttctgcacagcttatttgag
gaaattgagtttactcaaccagcgacaacggaagagaacacccaaattatcctcggttta
atggaaagtgagcagcttgatgaagagtggctaccaattctgcaacagttgattgatacc
gtgctggcaacgcctttggatagcaaagcactactgctcaatcaaaaaggtccggcgcaa
cgtttggttgagatggaattcttattaccgattgaagtactgtctgcacctgcattgaac
cgcgtgattcaacgtcatgatccgctctctgccaaagcgggcgatttgggtttccaaacc
gtgcaaggcatgttgaaaggctttattgacttggtgtttgagtaccaaggcaaatactac
gtcctcgactggaaatcgaaccacttaggtgatgatgtattccattatcatggcgatgcg
ttgaagtcggcgatggcggatcatcgctacgatctgcaataccaaatctatgctttggca
ctgcatcgtttcttgcgtagcagattgccaaattatgattatgaacagcactttggcggt
gtttattacctgttcttgcgtggtatggatgggcaaagtgatcatggtattttttctgcc
aagccaacctttgaatttttacaagagatggatcatttgattgatggtcaagcacctgac
acgcgatccagtgaatcggggcagatggagttaatttga

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