KEGG   Aliivibrio salmonicida: VSAL_I1801
Entry
VSAL_I1801        CDS       T00782                                 
Symbol
hipB
Name
(GenBank) HTH-type transcriptional regulator HipB
  KO
K15773  HTH-type transcriptional regulator / antitoxin HipB
Organism
vsa  Aliivibrio salmonicida
Brite
KEGG Orthology (KO) [BR:vsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vsa03000]
    VSAL_I1801 (hipB)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:vsa02048]
    VSAL_I1801 (hipB)
Transcription factors [BR:vsa03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    VSAL_I1801 (hipB)
Prokaryotic defense system [BR:vsa02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HipA-HipB
    VSAL_I1801 (hipB)
SSDB
Motif
Pfam: HTH_3 HTH_31 HTH_26 HTH_19 HTH_37 MarR HTH_24 MqsA_antitoxin HTH_Tnp_1_2 SidC_lipid-bd HNF-1_N MarR_2 HTH_Crp_2
Other DBs
NCBI-ProteinID: CAQ79486
UniProt: B6ENJ6
LinkDB
Position
1:1924100..1924351
AA seq 83 aa
MMIYNPKQLANYLKLIRTKHNLTQTELAKKVGVKQSTLSSFENHPETTQLQTLFKILHAL
EVHCIIQEQVPTSLDDNPDDEVW
NT seq 252 nt   +upstreamnt  +downstreamnt
atgatgatttataatccaaaacaattagctaactacttaaagcttattagaaccaaacac
aacctgactcaaacagagcttgctaaaaaagtcggtgtaaaacaatccaccctatctagc
tttgaaaatcaccctgaaacgactcagttacagactctctttaagatccttcatgcgtta
gaagttcattgtattattcaagagcaagtcccaacaagtctcgatgataatccagatgat
gaggtatggtaa

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