Vibrio scophthalmi: VSVS12_00544
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Entry
VSVS12_00544 CDS
T04650
Symbol
kdsD
Name
(GenBank) Arabinose-5-phosphate isomerase
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
vsc
Vibrio scophthalmi
Pathway
vsc00540
Lipopolysaccharide biosynthesis
vsc01100
Metabolic pathways
vsc01250
Biosynthesis of nucleotide sugars
Module
vsc_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VSVS12_00544 (kdsD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vsc01005
]
VSVS12_00544 (kdsD)
Enzymes [BR:
vsc01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
VSVS12_00544 (kdsD)
Lipopolysaccharide biosynthesis proteins [BR:
vsc01005
]
Lipid A
VSVS12_00544 (kdsD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
Regnase_1_C
DUF3659
Motif
Other DBs
NCBI-ProteinID:
ANS84350
UniProt:
A0A1B1NKU6
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All DBs
Position
1:complement(576084..577049)
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AA seq
321 aa
AA seq
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MFDYRAAALEVLNIEIEALKQLDQYFNDSFAQACETILANKNGKVVIMGMGKSGHIGNKI
AASLASTGTSAFFVHPGEAAHGDLGMIEPGDIVLAISNSGESGEILSLFPVLKRLKITII
SMTGKPTSNMAKLADIHLQITVPKEACPLGLAPTSSTTATLVMGDALAVSLLQARGFTAE
DFALSHPGGALGRKLLLKLSDIMHTGDELPLVSPQTLVRDALLEITQKGLGMTAVVDQDK
QLLGIFTDGDLRRILDKRIDIHSALISEVMTKNPTVANPNMLAAEGVNLMQEKSINGLLL
CENNTVVGALNMHDLLKAGVM
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattatcgcgctgccgcattagaagtgcttaatattgaaattgaagcattaaag
cagctagaccaatatttcaacgacagttttgctcaagcttgtgagacgattttagccaat
aaaaatggcaaagtagtgatcatgggaatgggtaaatctggacatattggcaataagatt
gccgcctctctggcgagtacaggtacttcagcgttttttgttcacccaggagaggctgca
cacggcgatcttggtatgattgagcccggagatatcgttctggcgatttcaaattcgggc
gaatcaggcgaaatattgtcattattccctgtgctaaaacgccttaaaatcaccattatc
agcatgacgggcaaaccgacatctaatatggcaaagctggcagatatccatctccaaatt
accgtgccgaaagaagcgtgcccactcggcttagctccgacctccagcaccactgcaacg
ttagtgatgggagatgcccttgcggtttctttattacaagcacgtggctttactgctgaa
gatttcgcattgtcgcaccctggtggggcacttggccgcaagctgttactaaaattatca
gacatcatgcacactggtgatgaactacccttagtttcaccacaaaccttagtgcgtgat
gcattgcttgaaataacacaaaaaggcctcggtatgacggcggttgttgaccaagataaa
cagctgctcggtatttttaccgatggtgacctacgccgaattttagataaacgcattgat
attcatagcgctcttatcagcgaagtgatgaccaaaaacccgaccgttgccaatccaaac
atgttggcggcagaaggtgtaaacttgatgcaagagaaaagcattaatggattactgctt
tgtgaaaacaacaccgtggttggtgcattgaatatgcacgacctactcaaagctggggtc
atgtaa
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