Vibrio scophthalmi: VSVS12_00708
Help
Entry
VSVS12_00708 CDS
T04650
Name
(GenBank) Oligopeptide transport system permease protein OppB
KO
K02033
peptide/nickel transport system permease protein
Organism
vsc
Vibrio scophthalmi
Pathway
vsc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VSVS12_00708
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsc02000
]
VSVS12_00708
Transporters [BR:
vsc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
VSVS12_00708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
BPD_transp_1_N
Archaeal_AmoA
DUF4535
Motif
Other DBs
NCBI-ProteinID:
ANS84505
UniProt:
A0A1B1NLI8
LinkDB
All DBs
Position
1:complement(756001..756987)
Genome browser
AA seq
328 aa
AA seq
DB search
MGYFLRRLSFYFVALLVAATLNFIIPRAMPGDPVTMMFANASVQVTPERIEAMKQLLGFV
DGPIWMQYFAYMKNILSWELGTSIQFYPLSVNTLLGGAFGWSLFLAGTAVVFSFSLGSIL
GIYAAWKRGSKYDAFITPGMLVIQAVPQVVIAMIALFTFAIGLKWFPTGYAYTAGTSPDW
TSWAFIKDVAYHAVLPLVCATIVQIGGFLVNMRNNMINLLAEDYITMAKGKGLSEKRIVF
NYAARNAMLPSVTALSMALGMAIGGQLIIEIIFNYPGLGSVLFNAIKARDYQVLQGQLLI
MTLFMLFFNLLADMLYVVLDPRLRKGGK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgggttattttttaagacgtttgtcattttattttgtcgctcttttagttgcggcaacg
ttgaactttattattccgcgagcaatgcctggtgacccagttaccatgatgtttgccaac
gcttcggttcaggttactcctgagcgtattgaagcaatgaaacaactactaggcttcgta
gatggtcctatttggatgcaatactttgcctacatgaaaaacattctgagctgggagctg
ggtacttcgattcaattctaccctctgtcagtaaacactctacttggtggtgcatttggc
tggtctctattcctagcaggtactgcagtagttttttcattctctcttggctcaatctta
ggtatctacgcagcttggaaacgcggtagtaaatacgatgcgttcattactcctggcatg
ctagttatccaagcagtacctcaagtcgttattgccatgattgcactgtttactttcgca
atcggtcttaaatggttccctacgggttacgcttacacagcgggtacatctcctgactgg
acaagctgggcgttcattaaagacgtcgcttaccacgcagtactaccgctagtgtgtgca
accatcgttcagattggtggcttcctagtaaacatgcgtaacaacatgatcaacctacta
gcggaagattacattacgatggcgaaaggcaaaggcctaagcgaaaaacgtattgtattt
aactacgcagctcgtaacgcgatgcttccaagtgtaaccgcactttcaatggcactaggt
atggcaatcggtggtcagttgattatcgaaatcatctttaactacccaggtctaggttca
gttctatttaacgcgattaaagcgcgtgattaccaagtacttcaaggtcagctacttatc
atgacgttattcatgctgttctttaacctacttgcagacatgctatacgtagttctcgac
cctcgcctacgtaagggaggtaaataa
DBGET
integrated database retrieval system
