Vibrio mediterranei: BSZ05_07745
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Entry
BSZ05_07745 CDS
T04936
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
vsh
Vibrio mediterranei
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vsh03019
]
BSZ05_07745
03009 Ribosome biogenesis [BR:
vsh03009
]
BSZ05_07745
Messenger RNA biogenesis [BR:
vsh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BSZ05_07745
Ribosome biogenesis [BR:
vsh03009
]
Eukaryotic type
Pre-60S particles
RNases
BSZ05_07745
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ASI89683
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All DBs
Position
1:1666984..1667529
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AA seq
181 aa
AA seq
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MSFSDDNLIWVDLEMTGLDPEQHKIIEIASIVTDSELNILAEGPVIAIHQSDEELAKMDD
WCTNTHTASGLVARVKDSEYDEAEAIKQTITFLEQWVPKGKSPICGNSIGQDRRFLYKHM
PELEEYFHYRYVDVSTLKELTRRWKPEVLDGFSKQGTHLALDDIRESIAELKYYRETIFT
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcagtgatgacaacttgatctgggttgatttggagatgacaggactggatcct
gagcaacacaaaattatcgaaatcgccagtatagtgacggacagcgagttaaacattctt
gctgaaggcccagtaatcgccattcaccaatcggatgaagagttggccaaaatggatgat
tggtgcactaatacccatactgcaagtgggctggtggctcgcgttaaagacagtgagtat
gatgaagcggaagccattaaacaaaccatcacgtttttagagcaatgggtaccaaaagga
aaatcaccgatttgtggcaatagtattggtcaagaccgacgttttctctacaaacatatg
ccggaacttgaagagtatttccattaccgatacgtggatgtcagtacgttaaaagaattg
actcgtcgttggaaaccggaagtccttgatggtttttctaaacaaggaacccatctagcg
ttggatgacattcgtgagtctattgctgaactcaaatattatcgtgagactatttttact
atctga
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