Vibrio mediterranei: BSZ05_09435
Help
Entry
BSZ05_09435 CDS
T04936
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
vsh
Vibrio mediterranei
Pathway
vsh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSZ05_09435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vsh03019
]
BSZ05_09435
Messenger RNA biogenesis [BR:
vsh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BSZ05_09435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
ASI89985
LinkDB
All DBs
Position
1:2002074..2002592
Genome browser
AA seq
172 aa
AA seq
DB search
MIDGDGYRLNVGIVICNNHGQVFWAKRYGQHSWQFPQGGIDDGESPEQAMYRELYEEVGL
TKNDVKIVAVSRHWLRYKLPKRLVRWDSKPVCIGQKQKWFLLRLDCDESKINMQRGNTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRAMKEFASLAMPFKERKFKGKRKHRRG
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
gtgatagatggcgatggttaccgacttaatgttggtattgtgatttgtaacaaccatggt
caggtcttctgggctaagcgatacggacaacattcatggcagtttcctcagggcggcatt
gacgatggtgaatcccctgagcaagccatgtatcgagaactttatgaagaggtgggatta
accaagaacgacgtcaaaatcgttgcagttagtcgccattggctgagatataagttaccc
aagcgattagtacgctgggattcgaagccagtctgtattgggcaaaaacagaaatggttt
ttactgcgtttagattgtgatgaatctaagatcaacatgcagcgtggtaatacccctgaa
tttgatggttggcgctgggtaagttattggtatccagtcaggcaagtggtttcttttaaa
cgggatgtgtatcgacgtgcgatgaaagagtttgcatcattggcaatgccgtttaaggaa
cgtaaatttaaaggcaagagaaagcatcgaagagggtaa
DBGET
integrated database retrieval system