Vibrio atlanticus: VS_II0711
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Entry
VS_II0711 CDS
T00812
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
vsp
Vibrio atlanticus
Pathway
vsp00230
Purine metabolism
vsp00240
Pyrimidine metabolism
vsp01100
Metabolic pathways
vsp01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
VS_II0711 (nrdD)
00240 Pyrimidine metabolism
VS_II0711 (nrdD)
Enzymes [BR:
vsp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
VS_II0711 (nrdD)
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Motif
Pfam:
NRDD
Gly_radical
ATP-cone
OrfB_Zn_ribbon
Zn_Tnp_IS91
Motif
Other DBs
NCBI-ProteinID:
CAV26396
UniProt:
B7VRW3
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All DBs
Position
2:774662..776785
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AA seq
707 aa
AA seq
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MVKSIVIKRDGSRAPFSRDRIQAAVEAASDKTDKEIAIYALNVALAVELKLEDYDEVHIS
EIQTMVENELMQGPYKSLARAYIEYRHDRDIAREKQSALTREIEGLIEESNVDLINENAN
KDGKVIPTQRDLLAGIVAKHYAKTHILPRDIVQAHECGDIHYHDLDYAPFFPMFNCMLID
LKGMLTHGFKMGNAEIDTPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLEPYVMAS
YEKHLSLAKEWDIHSPEAFATSRTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGE
SWGSKLIQQSILKNRIAGLGKNRKTAVFPKLVFAIKDGLNHQKQDPNYDIKQLALECASK
RMYPDILNYDKVVEVTGSFKTPMGCRSFLNTYEENGELIHEGRNNLGVVSLNLPRIAINA
KQDMAKFYELLDEKLKLARRALETRISRLENVKARVAPILYMEGACGVRLKADDSIADIF
KNGRASVSLGYIGIHEAMTALYGTDVHLYDDGEMRAKALELVEYMKREVESWTKETGYAF
SLYGTPSENLCSRFCSIDTKEFGVIDGVTDRGYYTNSFHLDVQKKVNPYDKIDFEMPYPE
ISSGGFICYGEFPNMQKNIEALENVWDYSYTRVPYYGTNTPIDECYECGYNGEFDCTSKG
FTCPKCGNHDSTKVSVTRRVCGYLGSPDARPFNFGKQEEVKRRVKHL
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtggtgaaatcaatcgtaatcaagcgtgatggctcaagagctccattcagtagagatcgc
atccaagctgcagtggaagcagcatcagacaaaaccgataaggaaattgctatttatgct
ctgaatgtggcattagcagttgagttgaagctcgaagactacgatgaagttcatatctct
gaaattcaaaccatggtcgagaacgagctaatgcagggaccatacaagtctcttgctcgt
gcctacattgaatatcgtcatgaccgtgacatcgcacgtgaaaagcaaagcgctttgact
cgcgagatcgaaggtctgatcgaagaaagcaatgttgatctgatcaatgagaatgccaac
aaagatggcaaagttatcccaactcagcgtgatttgctggcgggtatcgtggctaagcat
tatgcaaaaactcacattttgccgcgtgatatcgtacaagctcacgagtgtggtgacatt
cactatcacgatttagactacgcaccgttcttcccaatgtttaactgtatgcttatcgat
cttaaaggcatgttaacgcatggcttcaagatgggtaacgcggaaatcgacacacctaag
tctatttcaacggcgacagcggtaaccgcgcagatcatcgcacaagtagcgagccacatt
tacggcggtactacgattaaccgcattgatgaggttctagaaccttacgttatggcgagc
tacgagaagcacctatcactagcgaaagagtgggacattcacagcccagaagcttttgct
acctctcgtacagagaaagagtgttacgacgcattccaatctctggaatacgaagtaaac
acgctacatacagctaacggtcaaacaccattcgttacgtttggttttggtctaggcgaa
agctggggttcaaaacttatccagcaatctatcttgaagaaccgcattgccggtttgggt
aagaaccgcaaaacagccgtattccctaaactggtctttgcaatcaaagatggtttgaac
caccagaagcaagatccaaactacgatatcaagcaattagcgcttgagtgtgcatctaag
cgtatgtacccagacattcttaactacgacaaagtggtagaagtgacagggtcatttaaa
acgcctatgggctgccgtagcttcttgaatacttacgaagaaaatggtgagttgattcat
gaaggccgtaacaacttaggtgttgttagcttgaacttgccacgtattgctattaacgca
aaacaagatatggctaagttctacgaactgcttgatgaaaaattgaagctagctcgtcgc
gctctagaaactcgtatttctcgtctagaaaacgtgaaagcgcgtgttgcgccaatccta
tacatggaaggcgcttgtggcgttcgtttgaaagcagacgattctattgccgatatcttc
aagaatggccgtgcatctgtttctcttggttacattggcatccatgaagcgatgacagca
ctttacggcacagacgttcacctgtatgacgatggcgaaatgcgtgctaaagcgcttgag
ctggtggagtacatgaagcgtgaagtggaatcttggacaaaagagacaggttacgcgttc
agcttatacggcacaccaagtgaaaacctatgcagccgtttctgcagcatcgataccaaa
gagtttggtgtaattgatggtgtaactgaccgtggctactacaccaacagcttccactta
gacgtacagaagaaagtgaacccatacgacaagatcgatttcgagatgccttatccagaa
atctctagcggtggtttcatctgttacggcgaattcccgaacatgcagaagaacatcgaa
gcgctagaaaacgtatgggactacagctacacacgtgttccttactacggcaccaacacg
ccaattgatgagtgctacgaatgtggctacaacggtgagttcgactgtacaagtaaaggc
tttacgtgtcctaagtgtggtaaccatgactcaaccaaagtgtcggtaacgcgccgcgtt
tgtggttaccttggtagcccagatgcacgaccatttaacttcggtaagcaagaagaagtt
aaacgccgcgtgaagcacctgtag
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