Vibrio spartinae: Vspart_03997
Help
Entry
Vspart_03997 CDS
T07037
Symbol
sgrR_1
Name
(GenBank) HTH-type transcriptional regulator SgrR
KO
K11925
SgrR family transcriptional regulator
Organism
vsr
Vibrio spartinae
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vsr03000
]
Vspart_03997 (sgrR_1)
Transcription factors [BR:
vsr03000
]
Prokaryotic type
Helix-turn-helix
Other families
Vspart_03997 (sgrR_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SgrR_N
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QMV16601
UniProt:
A0A7D7X9U2
LinkDB
All DBs
Position
2:complement(628000..629691)
Genome browser
AA seq
563 aa
AA seq
DB search
MSSPRLRVQFETLFEHFDGQNMEVHLEDVTDILFCTRRNARIVLNKMEEEGWIEWHPAAG
RGKLSHLIFKRSRNDVSENLARRYLEEGKFGQAFSVLDQNADKLTQVIQNYLGVQHQQGR
QVVRLPYYRPLSMLNPRKPMRRSEQHIARQVFSGLTTFDENEMLQPDLAHSWQSLSANHW
RFYLRPGVRFHNGQLLTSALVVDSLCELQHFRLFHHIEEVSSPGDWVIDIHLSKPDFHLP
TLLAETCARIVSPNVQQENEFDIMPVGTGPFKVVINDDKRLILEAFDSYFGYRPLLDQIE
VCVIDEADSSLVFPTLNTPLKLRRGASREDVDLDPGCIYLQLNRRNGIACDRVWAEYLSS
KLSALSLFSLLPEETVVTWGMLPAHGLKPGWYHHRPCRQMILPAITRPVRIAYHAKHPMF
PHLVDVIQTLLTQDGIQVELSTYEHAVDVTQEIDIWIKAMGISNHRDDALAGWLLDYSHV
SQTSQPEDFAGWQQLIDCWRTEPEQPFPARDIGKSLIEKYQIVPLFHSWFGISHDQCGAL
QNAKCNALGWFDFGRVWVKPELD
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtccaagattacgtgtccagtttgaaaccttattcgaacactttgacggtcaa
aatatggaagtccatctggaagatgtgacggatatactgttttgtacgcgccgtaatgcc
cgtattgtcttgaataagatggaagaagaaggctggatcgaatggcatccggcagctggt
cggggcaaattatcacacctgatttttaaacgcagccggaatgatgtcagtgagaatctg
gcgcggcgataccttgaagaaggaaagttcgggcaggccttctccgtactggatcagaat
gccgataaactgacccaagtcatccaaaattatcttggcgtccagcatcagcagggacgc
caagttgttcgcctgccttactatcgtccgttatcaatgctcaatcctcgcaaaccgatg
cggcgttctgaacagcacattgcccgacaagtttttagtggtctcactaccttcgatgag
aatgaaatgcttcagcccgatttggcgcatagctggcagagtctgtctgcaaaccattgg
cggttttatttacgccccggtgtccgattccataatggtcaattgttgacatcagcgttg
gtcgttgacagtctttgtgagttgcagcatttcaggttgttccatcatattgaggaggtc
tcatcaccgggagattgggtgattgatattcatctgagtaaacccgattttcatttaccg
actttattagctgaaacgtgtgcaagaattgtgagtcccaacgttcagcaagagaacgag
tttgatattatgccggttggtaccggaccattcaaagtggtgattaatgatgataaacga
ctcattctggaagcatttgatagttatttcggttatcgtccgctgttagatcagattgaa
gtctgtgtcattgatgaagcggactcttctttggtatttccaaccctgaatacaccactc
aaactgagacgaggcgcgtctcgtgaagatgttgatttggatccgggatgtatttaccta
caattgaaccgtagaaacgggattgcctgtgatcgtgtgtgggctgaatacctgagtagt
aaactgagcgcactgagtctgtttagtctcttgccggaagaaaccgttgtgacgtgggga
atgttaccggcccacgggttgaaacccggatggtatcaccatcgtccctgtcgccaaatg
attctccctgcgataacgcgtccggttcggatcgcctatcatgccaagcatccgatgttt
cctcacttggttgacgtgattcagactttattgacgcaagatggtattcaggttgaactg
agtacgtatgaacatgcggtggatgtaacccaagagattgatatctggataaaagcaatg
ggcatatcaaaccatcgcgatgatgcactggcgggatggcttttggattactctcatgtt
agtcagaccagtcagccagaggattttgccggttggcagcagttgattgattgctggcgg
actgagcctgaacagccatttcctgccagagacatcggcaagtctttgattgaaaaatat
caaatagtgccactgtttcacagttggtttggcatcagtcacgaccagtgtggtgcattg
caaaacgccaaatgtaatgctctgggatggtttgattttggccgggtatgggtcaaaccg
gagctggattga
DBGET
integrated database retrieval system
