Vigna unguiculata (cowpea): 114176271
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Entry
114176271 CDS
T06017
Name
(RefSeq) chromatin structure-remodeling complex protein BSH isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03082
ATP-dependent chromatin remodeling
vun03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114176271
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
114176271
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vun01009
]
114176271
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vun03021
]
114176271
03036 Chromosome and associated proteins [BR:
vun03036
]
114176271
Protein phosphatases and associated proteins [BR:
vun01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114176271
Transcription machinery [BR:
vun03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114176271
SWI/SNF complex
114176271
Chromosome and associated proteins [BR:
vun03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114176271
PBAF complex
114176271
SWI/SNF complex
114176271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
114176271
NCBI-ProteinID:
XP_027917054
LinkDB
All DBs
Position
3:61177740..61181062
Genome browser
AA seq
240 aa
AA seq
DB search
MKTPISGFYRNPVKFRMPTAENLVPIRLDIEIEGQRYKDAFTWNPSDPDSEVVVFAKRTV
KDLKLPPAFVTQIAQSIQSQLLEFRSYEGQDMYAGEKIVPIKLDLRVNHTLVKDQFLWDL
NNFESDPEEFARIFCKDMGIEDPEVGPAIAFAIREQLYEIAIQSVVSARESRMSKKGRRG
AEYTPISRGGAVAVDLVKLFGPKSSVVRKRKEWDVYEPIVDLLSNEEVDALEAKEERNFR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccccgatttcgggtttctatcgaaaccctgttaagttcagaatgccaactgca
gagaacttggttcccattcgattggatatcgaaatagaagggcagagatacaaagacgca
ttcacttggaacccttctgatcccgactccgaggttgtggtctttgcaaaaaggactgtt
aaagacttgaagctccctcccgcctttgttacacaaattgctcaatctattcaatcacag
ctcttggagtttagatcctatgaaggccaggatatgtatgctggggagaagattgttccg
atcaagctcgatcttcgtgttaatcatacgcttgtgaaggaccagtttttatgggacttg
aacaactttgagagtgaccctgaagagtttgctagaatcttctgcaaggacatgggcatt
gaagatcctgaggttggaccagctattgcctttgctatcagagagcaactttatgagatc
gcaattcaaagtgtggtctcagcaagagaaagcagaatgagcaagaagggtcgtcgaggg
gctgaatatactccgatcagtagaggaggtgctgtagcagtggacttggtcaagttattt
ggtccgaaatctagtgtagtccggaaaagaaaggagtgggacgtgtatgaacctattgtg
gacctactttccaatgaggaagttgatgcccttgaagcaaaggaagagagaaatttcagg
tga
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