Vigna unguiculata (cowpea): 114193922
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Entry
114193922 CDS
T06017
Name
(RefSeq) uncharacterized protein LOC114193922
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114193922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vun03021
]
114193922
03019 Messenger RNA biogenesis [BR:
vun03019
]
114193922
Transcription machinery [BR:
vun03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
114193922
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
114193922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
114193922
NCBI-ProteinID:
XP_027939712
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All DBs
Position
8:23344..31236
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AA seq
622 aa
AA seq
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MANNANSSSKTQPPYAPNPNHQNFLQNNGVGMTPQPQFCSGNHQSQSLSPPFMQRLPMNV
APFMNAANHNYFPLQNDQMHLCQMGMPGHQQGQPLVGVLGPQNNVGNPNYSNPMYPVQGQ
VILNAAQINLSHLQGQMLAQSILNILQPSNVNMSMPNGQFRAPYPMQNMNQQLPTQMSSP
SQVVPHGMHPGSFPMFGFPNQLPQAMVPQSSLLSPSPQLGFEPGRHVRLHIDPNEKNLAP
PNVNANAFVSQSPFSSHQLQGNTSGSLNSDLAHTSNSQPPALLKSHSQVNPYGNIKTNVP
NTNWNGSPSKNFKNRPTRGGFKGGFQKSKFNDVNNGKRRTGFLKDHNGRGPYSGRAAQDS
VRSKELKQQLERSFSVTYTEQEIKQWREARKKNHPCNNFQKRHCEWPMDSKVIKREVLQR
ELKEVLAKQAELGIEVAEIPSHYLKNSDNQGLQNEGKNKFSDKRKFQNKFNKKLDRKGRF
GKKQKFADFSESPSLKMRKPTLLQKLLSADISKDKSHLFQVFRFMVINSFFKHCPDKPLR
YPSVMVKENWSEVDTKKDIPKRGNEGAVKKIASLNNDDHSSEDEDSDVDENDSIVHNNPH
KELFSLVKEGFEKSDEEGEILE
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaatgccaactcctcctccaaaacccaacccccttatgctcctaatcctaac
catcaaaatttcttacaaaacaatggtgtgggcatgacaccccagccccaattttgttct
ggcaaccaccaaagccaaagcctgtcacccccttttatgcagcgactacctatgaatgtg
gcacctttcatgaatgctgcaaatcataattattttcccttgcaaaacgatcagatgcat
ctgtgtcaaatgggtatgcctggtcatcaacagggtcaaccccttgtgggggttttaggt
ccccaaaataacgttggcaatcccaattacagcaatccaatgtatcctgttcagggacaa
gtcatactgaatgcagctcaaatcaatttgtctcatttacagggacaaatgttggcacag
agtattttgaatatacttcagccgtctaatgtgaatatgagtatgccaaatggccaattt
cgtgccccttatcctatgcagaatatgaatcaacagttacctacacaaatgtcaagtcct
tctcaagtggttccgcatggcatgcatcctggttccttccccatgtttgggtttccaaac
caactgcctcaggctatggtccctcagagttcattactttctccaagtccacagttaggt
tttgagcctggaaggcatgtccggctgcatattgacccgaacgagaaaaaccttgctcca
ccaaacgtgaatgcaaatgcttttgtatcacagtcgcctttttcatctcatcaattacaa
gggaatacttctgggtcacttaattctgatttggctcatacaagtaactctcaacctcct
gcacttttaaagtcgcactcacaggtgaatccttatggaaatattaaaactaatgttcca
aataccaactggaatggatcacccagcaaaaacttcaaaaatagaccaacacgagggggg
tttaaaggaggattccagaagtctaaatttaatgatgtgaataatggaaagcgcagaact
gggtttcttaaagatcataatggaagaggcccttacagtgggagggcagcacaggatagt
gtaagatcaaaggaacttaagcagcaactagaaagatctttctctgtgacttacactgag
caagaaatcaaacaatggcgtgaagcacggaaaaagaatcatccttgtaacaactttcag
aagaggcactgtgaatggccgatggactccaaggtcattaaaagggaggtcttacaaaga
gagcttaaggaggttttagcaaagcaagctgaattgggaatcgaagttgctgaaatacca
tcacactaccttaagaattctgataatcaaggtcttcagaatgaagggaaaaacaaattt
agtgacaaaagaaagttccaaaacaagttcaacaagaaattagacagaaaaggtcggttc
ggcaagaagcaaaagtttgctgacttttcagaaagcccttcattaaaaatgaggaagcca
actttattgcagaaactcttgagtgcagatataagcaaggataagagccacctgtttcag
gttttcaggttcatggtaataaattctttcttcaaacattgtcctgataagccacttaga
tatccatcagtcatggttaaagagaactggtctgaagttgacactaaaaaagatattcct
aaacgcgggaacgagggagctgtcaaaaaaattgctagcctaaataatgatgatcatagt
agtgaagacgaagacagtgatgtggatgagaatgactctattgtacataataatccacac
aaagaacttttttccttggttaaagaaggatttgagaaatctgatgaagagggagaaatt
ttagaatga
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