Vitis vinifera (wine grape): 100240794
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Entry
100240794 CDS
T01084
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 3 isoform X2
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100240794
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vvi01009
]
100240794
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvi03021
]
100240794
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100240794
03041 Spliceosome [BR:
vvi03041
]
100240794
Enzymes [BR:
vvi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
100240794
Protein phosphatases and associated proteins [BR:
vvi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
100240794
Transcription machinery [BR:
vvi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100240794
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100240794
Spliceosome [BR:
vvi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100240794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
100240794
NCBI-ProteinID:
XP_002285139
UniProt:
D7SZF7
LinkDB
All DBs
Position
5:join(8082636..8082810,8085167..8085726,8085822..8086043,8087293..8087316)
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AA seq
326 aa
AA seq
DB search
MEPAVLDDIIERLLAVKARPGKQVQLSEAEIRQLCVASKDIFLRQPNLLELQAPVKICGD
IHGQYSDLLRLFDYGGLPPESNYLFLGDYVDRGKQSLETICLLLAYKIRYPENFFLLRGN
HECASINRIYGFYDECKRRFNVRLWKVFTDCFNCLPVAALIDEKILCMHGGLSPDLRSLD
QIRNLQRPTDVPDAGLLCDLLWSDPSNDVRGWGMNDRGVSYVFGPDKVTELLQKHDLDLI
CRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDDTLMCSFQVLKPAEKNKK
FSFGSTTTAKPGSCPARLKSILGAKV
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggaacctgccgttcttgacgatattatcgaaaggttacttgccgtcaaagccaggcca
gggaagcaagtgcagctttctgaggccgagatcaggcagctttgtgttgcttccaaggat
attttcctgagacagcccaatctattggagctccaagcccccgtcaagatctgcggggac
attcatggtcagtattcggatcttctaaggctttttgactatggtggactgccgcctgaa
tccaattacttgttcttaggggactatgtagatcgaggaaagcaaagcctggaaactata
tgccttctgcttgcatataaaataagataccctgagaactttttcctattgaggggcaac
catgaatgtgcttctataaaccgtatctatggattttatgacgagtgtaagagaagattc
aatgtcagattgtggaaagtgttcacagattgtttcaattgcctacctgtggctgctctc
attgatgaaaagatactctgcatgcatggtgggctttcccctgatctgcggagtttagat
caaataaggaatttgcagcggcctactgatgttccagatgctggtttgctatgcgatctt
ctctggtctgatcctagtaatgatgttcgaggttgggggatgaatgatagaggcgtttct
tatgtctttggccctgataaggtgacagagcttcttcagaagcatgatctggaccttatt
tgtcgtgcccaccaggttgtggaagatggatacgagttttttgctaatagacaacttgta
accatattttcagcacctaattactgtggtgagtttgataatgcgggtgccatgatgagt
gtggatgacactctcatgtgttctttccaagtattaaaacctgcagaaaagaataaaaaa
tttagctttggaagcactactacagctaagcctggcagctgtcctgcaagactcaagtct
atccttggtgcaaaagtatga
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integrated database retrieval system
