Vitis vinifera (wine grape): 100243870
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Entry
100243870 CDS
T01084
Name
(RefSeq) proteinaceous RNase P 1, chloroplastic/mitochondrial
KO
K18213
proteinaceous RNase P [EC:
3.1.26.5
]
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vvi03016
]
100243870
Enzymes [BR:
vvi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
100243870
Transfer RNA biogenesis [BR:
vvi03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
100243870
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRORP
PPR_long
PPR_2
PPR
PPR_3
RNase_Zc3h12a
PPR_1
Motif
Other DBs
NCBI-GeneID:
100243870
NCBI-ProteinID:
XP_002280803
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All DBs
Position
11:join(3020313..3022163,3022247..3022336,3022452..3022633,3022795..3022915,3025501..3025569,3025762..3025891,3026522..3026763)
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AA seq
894 aa
AA seq
DB search
MALFTINNTLHQKHFFCNCKCPSPFNAFKFHHSSHFLTFSSPKHTPPPRKSALLIVRPHV
GHLYAKLCTADHEPSTADMGGRTGKETGSGFSSYGSKGERVGRKSVKTHVGWAVEEKNEK
RFTRERYSKKRLDSRRNGGTSSKFPSLKSESKNLVNKSLKANEKEEEKSKKGDADKVREE
MEKGSKKNKVDSQEGLLRVGLEMCSKNGDVMGALELYDSALREGIELGQYHYTVLLYLCS
SAALGVIRPAKSGTGSRSLDMLSPSSEVRGGVSEDLAEFGDTSKKNFGGPESKIPVSNNA
MSVYSTKIHQNSPKKVLNSNRSAFEVAKDDLDGSITEMDKLSQVSNCFNQSNSQLLEGQM
HLRKGVDDSTNKKEDNEIRVSEDFKKYALRRGFEIYEKMCLEKVPMNEATLTSVARMAMS
MGNGDMAFDMVKQMKPLGINPRLRSYGPALSAFCNNGDIEKAFGVEEHMLEHGVYPEEPE
LEALLRVGIEAGKSDKVYYVLHKLRTSVRQVSHSTANLIEKWFKSNAAAAAGKGNWDQRL
ISEAIVNGGGGWHGQGWLGKGKWNVSHTNVGADGLCLCCGEKLATIDLDPTETEKFAESV
ASIAIKREKNSSFQKFQKWLDYYGPYEAVVDAANVGLFSQRRFIPSKVNAIVNGIRQMLP
SKKWPLIILHNKRITGKKMDEPANRALIEKWKNADALYTTPTGSNDDWYWLYAAIKFKCL
IVTNDEMRDHIFQLLGNDFFPKWKERHQVHFSFSDSGPVFHMPPPCSVIIQESENGHWHI
PVASEHDSEGERTWLCVTRANSQMAKQSPSPRNKESQYPCYDKRRVRSDTQTEIHKELSS
SNHRNQEKSKAPPQEIYRNLRNILSASIFPTHSTVLSEIEAAEKLGNCIIDFQI
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggccctcttcaccatcaacaacactctgcaccaaaagcacttcttctgtaactgtaag
tgcccttcaccgttcaatgcctttaaattccaccattcttctcattttctcactttctca
tctcccaaacacacacccccaccaagaaaatctgcacttcttattgttagaccacatgtt
gggcacctgtatgcaaagttgtgtactgcagaccatgaaccttctacagcggacatgggt
ggtagaactggtaaagaaactggttctgggttttcttcctacgggtccaaaggtgaaagg
gtagggagaaaatctgtgaaaacccatgttggttgggcagtggaggaaaagaatgagaag
aggtttacaagagagaggtattcaaagaagaggttagattcaaggagaaacggaggaacg
agttccaagtttccttccttgaagtctgaaagtaaaaatttagtgaacaaatctttgaaa
gctaatgaaaaggaggaagaaaaatccaagaaaggtgatgctgataaggtaagagaggag
atggagaaggggtctaagaaaaataaggtggattctcaggaagggctgttaagagttgga
ctggaaatgtgctcaaaaaatggggatgttatgggtgcgcttgaactgtatgattcggct
ctgagggaaggaattgagttagggcagtatcattatactgttcttttgtatctttgttct
tcagcagcacttggtgttattcgacctgcaaaaagtggaactggtagccggagtttggac
atgctcagcccttctagtgaagttcgtggtggggtttccgaggatttggcagaatttggg
gacactagcaagaagaattttggtggtccagaatcgaaaattccagtttcaaacaatgcg
atgtcagtttattctactaaaattcatcaaaactcccctaaaaaggtgttgaattctaat
aggtcagcatttgaagtagcaaaagatgatttggatggtagtatcactgaaatggacaag
ttatcccaggtctctaattgctttaatcagtcaaatagtcaacttttggaaggtcaaatg
catttaagaaagggtgttgatgactccacaaataaaaaggaagataatgaaattcgggta
agtgaagatttcaagaagtatgcactccggaggggatttgaaatctatgagaagatgtgt
ttggaaaaggtcccaatgaatgaagcaaccttgacatcggtggcgagaatggcaatgtcc
atgggtaatggtgacatggcttttgatatggtaaagcaaatgaaaccactggggataaac
cctagattgcggtcttatggtcctgcactttctgctttctgcaataatggagatattgag
aaagcatttggtgttgaagaacacatgttggagcatggtgtctatcctgaagagccagaa
ctggaagcattgttaagagtaggtatagaagctggaaaaagtgacaaggtctattatgta
ttgcataagcttaggacaagcgtaagacaggtctctcattctactgcaaatttgatagag
aaatggttcaaaagcaatgcagctgcggctgcaggaaaaggaaattgggatcaaagattg
atatcagaagcaattgtgaatggaggtggaggctggcatgggcagggttggctgggtaaa
ggaaaatggaatgtttcacacacaaatgttggagctgatggtttatgcctatgctgtggg
gaaaaattggccaccattgaccttgatcctacagaaactgagaaatttgctgaatcagtc
gcatctatagctataaagagagagaaaaattcaagctttcagaaattccaaaagtggcta
gactactatggaccttatgaagcagtggtagatgcagctaatgtgggtcttttcagccag
aggagattcataccatccaaggtcaatgccattgtgaatggaataaggcagatgcttcct
tcaaagaaatggccactcattattttgcataacaaacgaatcactggaaaaaagatggat
gaaccagcaaatagggcattgattgagaagtggaaaaatgctgatgccctctatacaacg
cctactggatcaaatgatgactggtactggttgtatgcagctataaagtttaagtgctta
attgtgacaaatgatgagatgagagaccatatatttcaacttttggggaatgatttcttt
ccgaaatggaaagaaaggcatcaagtacatttcagtttttctgatagtggtccagtgttt
cacatgcctcctccttgctctgttataattcaggaatcagagaatggacactggcatatt
ccagttgcatcagaacatgattctgaaggggaaagaacatggttatgtgttacccgagct
aactcacagatggcaaagcaaagcccttcccccagaaacaaagaatcacagtatccttgc
tatgacaagagacgggtaaggtcagatacccaaacagaaattcacaaagagctatcatca
tcaaatcacagaaaccaggaaaaatcaaaagctccacctcaggaaatctacagaaatctc
agaaatattctgtcagcatctatctttccaactcattctacagtcctatcagaaattgag
gctgcagagaagcttggtaactgtattattgatttccaaatataa
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