KEGG   Vitis vinifera (wine grape): 100246144
Entry
100246144         CDS       T01084                                 
Name
(RefSeq) DNA topoisomerase 1 alpha
  KO
K03163  DNA topoisomerase I [EC:5.6.2.1]
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vvi03032]
    100246144
Enzymes [BR:vvi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     100246144
DNA replication proteins [BR:vvi03032]
 Eukaryotic type
  DNA Topoisomerases
   100246144
SSDB
Motif
Pfam: Topoisom_I_N Topoisom_I Topo_C_assoc
Other DBs
NCBI-GeneID: 100246144
NCBI-ProteinID: XP_002266885
UniProt: D7SWQ4
LinkDB
Position
19:join(24881084..24882139,24882228..24882422,24883363..24883443,24884166..24884225,24884364..24884458,24884579..24884735,24884820..24884945,24894062..24894142,24894400..24894490,24894584..24894717,24895360..24895428,24895518..24895607,24895896..24895996,24896082..24896250,24896350..24896418)
AA seq 857 aa
MAVEACVNPKMFNNEVDDDDDDERPLVFKRSSNSSASNNNSRLKIQSISGSKRPDDAHSN
GQKKDKGMAPPMPAKGSGRVTGSVKSPPQQVGRGVVVGNSKVEAQNKKAELDSDSEDDKP
LSVRLSSGLPKGKGSSNNVGLGRGGVGGVKKEEDDDDDDKIPLSSKFQLKSDEKKPLPLK
VNQNGGTDKRDKSPTVLNKKRPLDGVNSSLGQSSLVKKPKISGQSAQPFKVTHATAKAEP
KVEDDDDDDMPISQRMKKSGASSGNKPVPAKQKVTKVVSSTSFKKTKDIKSKKMEKNSKY
SKSTKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVM
LDTDYMQKEKFKENFMADWRKILGKNHVIQRLDDCDFTPIYEWHQEEKEKKKQMSTEEKK
TLKEEKLKLEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIHPSDITIN
IGKNSQIPECPIPGESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEK
YEKARKLKNYIKDIRATYTKDFVSKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGC
CTLKVENVIPEPPNSLQFDFLGKDSIRYEKTVEVELPVYKAIEQFRVGKSGSDDLFDKLD
TSKLNAHLKELMPGLTAKVFRTYNASITLDEMLNKDTKEGDVAQKVVVYQHANKEVAIIC
NHQRTISKSHTAQMTRLTEKIDEMKGVLNGLKTDLARAKKGKPPLKDADGKRRNLTPEAL
ERKIAQTNAKIEKMERDKDTKEDLKTVALGTSKINYLDPRISVAWCKRQEVPIEKVFNKS
LLAKFAWAMDVPPDFRF
NT seq 2574 nt   +upstreamnt  +downstreamnt
atggctgtggaagcttgtgttaatccgaaaatgtttaataacgaggtagacgacgacgat
gatgacgagaggccattagttttcaaaaggagtagtaacagttcagcttcaaataataat
tccaggcttaaaattcaatccatttcgggttcaaaacggcctgatgatgcccattccaat
gggcaaaagaaggacaagggaatggccccgcccatgcctgccaagggatcggggcgggtg
acggggtcagttaagtcgccgccgcagcaggtgggcaggggggtagtggtgggtaattca
aaagtggaggcgcaaaataaaaaggctgaattggatagcgattctgaggatgataaacca
cttagtgttaggctttcttctgggttgccaaaggggaaggggagctctaacaatgtcggt
ttgggaagagggggggttggtggtgtcaagaaggaagaggatgatgatgacgatgataaa
attccattgtcatcgaagttccaactgaaatcggatgagaagaagcctctgcctttgaaa
gttaatcaaaatggtggaactgataagagggataagtctcccacagtgctaaataagaag
agacctctagatggggttaattcttctttgggtcagtcttcgctggttaaaaagccaaag
atttctggtcaatctgcacagccattcaaagttacgcatgcaactgcaaaagcagaaccg
aaggtggaagatgatgatgatgacgatatgcctatttcccagagaatgaagaaatcagga
gctagctcaggcaacaaaccagtgccagcaaagcaaaaggtaacaaaagttgtttcttct
acttcgtttaagaaaaccaaagacatcaagtccaagaagatggagaaaaattcgaaatac
tctaagtcgacaaaagtgccacctagctctggtgaagggcagaagtggactaccttggtt
cataatggtgtcatttttccgcctccgtacaagcctcatggggtgaagatgctctacaag
gggaaaccagttgacttgactcctgaacaagaggaggttgccacaatgtttgctgtgatg
ttagacacggactacatgcaaaaagagaaattcaaggagaatttcatggctgattggaga
aaaatacttggaaagaaccatgtgattcagagactggatgattgtgatttcactcctata
tacgaatggcatcaggaggaaaaggaaaagaaaaaacaaatgagtactgaagagaagaag
accttaaaagaagagaaattgaaactagaggagaaatatatgtgggctattgttgatggt
gtcaaagagaaggttggaaactttagagttgaaccccctgggttgttccgaggccgtggg
gagcatccaaagatgggaaagctgaaaagacggattcatccaagtgacattactattaat
attggaaagaactctcaaattcctgaatgtcctatacctggtgaaagctggaaagaagta
aagcacgacaatactgttacatggttagctttctggaatgatccaatcaacccaaaggaa
ttcaagtatgtatttttggcggctagcagttccttgaagggtcaaagcgacaaggagaaa
tatgagaaagcaaggaaactaaagaactatataaaagacatcagagcaacatacactaag
gattttgtaagtaaagatattacaaagcggcagatagcagttgccacctatcttattgat
aaactagctctaagggcaggcaatgagaaggatgatgatgaggcggatactgttggttgc
tgtaccttgaaagtagaaaatgtaatacctgaaccgccaaattccttgcagtttgatttc
ctcggtaaagattcaattagatatgaaaagacagttgaagttgagcttcctgtatacaag
gcaattgaacagttccgagtggggaaaagtggtagtgatgatctttttgacaagctggat
accagtaaactaaatgctcatctaaaggaactaatgccgggcctcacagcaaaggttttc
cgtacatataatgcatctatcacgttggatgagatgttgaataaagacaccaaggaagga
gatgttgcacagaaagttgtagtttatcagcatgcaaacaaggaggttgctatcatttgt
aaccatcaacggactatctcgaagtctcatacagcacaaatgacaaggttgactgagaag
atagatgaaatgaagggtgttcttaatgggctgaaaacagatttagctagagccaagaag
gggaagccccctttgaaggatgctgatgggaagcgaaggaacctgacccctgaagcatta
gagaggaagatagctcaaacaaatgcaaagattgagaaaatggagcgggacaaggatacg
aaagaggatctaaaaactgttgcattgggtacctcaaagatcaactaccttgaccccagg
atctcagttgcatggtgtaaacgacaggaagttcccattgagaaggtattcaataagtct
ctcctggcaaaatttgcctgggcaatggacgttcctccggatttcagattctga

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