KEGG   Vitis vinifera (wine grape): 100247769
Entry
100247769         CDS       T01084                                 
Name
(RefSeq) protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X1
Organism
vvi  Vitis vinifera (wine grape)
SSDB
Motif
Pfam: NHL HAD_2 Hydrolase Thioredoxin_8 Redoxin AhpC-TSA SGL Hydrolase_like Arylesterase Thioredoxin DUF5128 HAD Thioredoxin_2
Other DBs
NCBI-GeneID: 100247769
NCBI-ProteinID: XP_002277564
UniProt: F6I4T4
LinkDB
Position
14:complement(join(833943..834104,834847..834996,835174..835421,836618..836654,837333..837425,837902..838009,838174..838295,838395..838444,838988..839145,839273..839366,839902..839966,840125..840229,842518..842715,843514..843636,844068..844163,845102..845212,845666..845741,845941..846001,846267..846345,846503..846590,847696..847828,848179..848303,848719..848777,848885..848984,849199..849293,849382..849438,849530..849630,850303..850645))
AA seq 1078 aa
MALRLSSSQRHHTTPFIFPPPSISTPLSLIRRLSSRHVSLRHRRTAAPKACVKLEEKNVP
ETGKSQWGKVSAVLFDMDGVLCNSEEPSRRAGVDVFHEMGVQVTTEDFVPFMGTGEANFL
GGVASVKGVKGFDPEAAKKRFFEIYLEKYAKPNSGIGFPGALELINQCKSNGLKVAVASS
ADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAASKILDVPPGECIVIEDAL
AGVQAAKAAQMRCIAVTTTLPEETLKAAGPSLIRKEIGNVSVHDILTGGSDCPNEKIQGS
QYINSFEQTSPEVLKEGAESVSIQETNSDGGGVLSIAGLQGSRRDMVRYGSLGIALSCLA
FAVSNWKAMQYASPKAIWNLLFGVNRPTFGKNEGESQTGRIQQFVNYISDLESRGNATTV
PEFPSQLDWLNSAPLQLRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLETKYKDKPFTVV
GVHSAKFDNEKDLEAIRNAVLRYGINHPVVNDGDMYLWRELGVNSWPTFAVVGPNGKLLA
QLSGEGRRKDLDDIVAAALIFYGEKKMLDNSPLPLSLEKENDPRLLTSPLKFPGKLAIDV
INNRLFISDSNHNRIVVTDLNGNYILQIGSTGEEGLRDGSFDDATFNRPQGLAYNAKKNL
LYVADTENHALREIDFVNETVQTLAGNGTKGSDYQGGGKGATQLLNSPWDVCFEPINEIV
YIAMAGQHQIWEHNTLDGVTRAFSGDGYERNLNGYSSTSTSFAQPSGISLSPDLKEVYIA
DSESSSIRALDLKTGGSRLLAGGDTVFSDNLFRFGDHDGVGSEVLLQHPLGVSCGKDGQI
YVADSYNHKIKKLDPATGRVSTLAGTGKAGFKDGRALAAQLSEPSGIVEVENGVLFIADT
NNSVIRYLDLKKKEADLVTLELKGVQPPIPKSRSLKRLRRRSSADTQTITADGTSSNEGN
LYIRISVPEGYHFSKEAQSKFSIETEPETTMVIAPLDGILSPGGFATLHFRRSSPSAFMA
RVNCKVYYCKEDEVCLYQSVAFEVPFRDAIPGSSPAEISLDYAVKPKTPTNSLLAVAR
NT seq 3237 nt   +upstreamnt  +downstreamnt
atggcactgagactctcatcttctcagcgccaccacaccacccctttcatcttcccgcca
ccgtcgatctcaaccccactttctctcatccgaaggctctcctctcgccacgtgtccctc
cgccaccggaggacggcggcgcccaaggcctgtgtgaagcttgaggagaagaatgttcca
gaaactgggaagtcccagtgggggaaagtgtctgctgtgttgtttgacatggatggcgtg
ctctgtaacagtgaagaaccttctagaagggctggagtcgacgtgttccatgaaatgggt
gtgcaagtaacgactgaggatttcgtgcccttcatggggactggtgaagctaatttttta
ggaggtgttgcttctgttaagggagttaaggggttcgatcctgaggcagcaaagaaaagg
ttctttgagatatatctagagaagtatgcaaaaccaaattctggaataggattcccaggt
gcccttgaactcattaatcagtgtaaaagcaatggcctaaaagttgcagttgcatctagt
gctgaccgcatcaaggttgatgcaaatttagctgctgcaggtctaccattgtcaatgttc
gatgctattgtatcagcagatgcatttgagaatttgaaacctgcaccagatattttttta
gcggcatcaaagatcttggatgtgccccctggtgagtgtattgtaattgaagatgcacta
gctggagtacaagctgccaaggctgcacaaatgagatgtatagctgtgacaactacatta
ccggaagagactctaaaagcagctggtccttcacttatcagaaaggagataggaaatgtt
tcagtgcatgatattctcactggtggctctgattgccctaatgagaagatacagggatct
cagtatattaattcttttgaacaaacttcacctgaagtgcttaaagaaggagcagaaagt
gtatcaatccaggaaacaaactctgatggtggtggggtcctctcaattgcggggttgcag
ggttcacggcgagatatggtgagatatggaagtttgggcattgctctctcttgtcttgca
tttgctgtctcaaactggaaggcaatgcaatatgcatctcctaaagctatttggaattta
ttgtttggagtcaatcgtcctacttttggaaagaatgaaggggaatctcaaactggaaga
atccaacaatttgtgaactatatatctgatttggaaagcaggggaaatgctactactgtg
cctgagtttccatctcaacttgattggctgaattcggctccccttcaattacgcagggat
ctgaaaggcaaggtggttgtactggatttttggacctattgttgtataaattgtatgcat
gtcttgccagatctagaatttttggagacaaagtacaaagataagccgttcactgttgtg
ggagtgcattctgcaaagtttgataatgagaaagacttagaggccatccgcaatgcagtt
ttacgctatggcatcaatcatccagttgtcaatgatggagatatgtatttatggagagag
ctaggtgtgaattcatggcctacatttgctgttgttgggcctaatggtaagctccttgca
cagttatcaggtgaaggtcgccgaaaggaccttgatgatatagtggcagcagctcttatt
ttttatggcgaaaagaaaatgttagacaactctccacttcccttgagtttggagaaagag
aatgatccccgtttattgacatctcctttgaagtttcctggaaagctggcaattgatgtc
atcaacaacaggctgttcatttcagacagtaaccataaccgcatagtggttacagaccta
aatgggaattatattctccagatcgggagcacaggagaagagggtctacgtgatggtagc
tttgatgatgccaccttcaatcgccctcagggtctggcttacaatgcaaagaaaaatctc
ctctatgttgcagatactgaaaaccatgctttgagggagattgactttgttaatgagaca
gtacaaactcttgctggaaatggaacaaaaggttctgactaccaagggggaggaaaaggg
gcaactcagctcctcaactctccatgggatgtctgcttcgagccaatcaatgagatagtt
tatattgcaatggctggccaacatcagatctgggaacataatacattagatggagtcaca
agagcatttagtggtgatggttatgaaagaaacttgaatggatacagctctacaagcaca
tcatttgctcaaccttctggaatttcattatctcctgatctaaaggaagtatatattgct
gatagtgaaagtagctccatacgggcacttgatctgaagacaggaggatcaagattgcta
gctggtggggatacagttttctcagacaacttgttccggtttggagatcatgacggagta
gggtctgaagtcctccttcaacatccattgggtgtctcgtgtggaaaggatggtcaaatt
tatgtagcagattcttataatcacaagatcaagaagctagacccagctactggaagagtt
agtacattagcaggaacagggaaagcaggtttcaaggatggaagagccctagctgctcag
ctctcagagccatcaggaattgttgaagtagaaaatggggtcctttttattgctgataca
aacaacagtgtaataagatacttagacttgaaaaagaaagaagctgatcttgttactcta
gagctgaaaggagttcagcctcctataccaaaatcccgatctttgaaacgccttagaaga
cgatcatcagctgatacacagaccattacagctgatggtacttcatccaatgagggaaat
ctgtatattagaatatcagttccagaagggtaccatttctcaaaggaagcccagagtaaa
ttcagtatagaaactgagcctgaaactacaatggtcattgctcccttggatggaatccta
agcccgggaggatttgcaactcttcattttaggagatcctctccgtcagctttcatggca
agagtaaattgcaaggtgtactattgtaaggaggatgaggtctgtttgtaccaatctgtg
gcttttgaggtaccattccgagatgcaattccaggttcgagtcctgcagaaatttcactt
gattatgctgtgaagcccaaaacacccacaaacagcttactagcagttgcccgttga

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