Vitis vinifera (wine grape): 100259525
Help
Entry
100259525 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100259525
Organism
vvi
Vitis vinifera (wine grape)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH
CCDC144C
Shugoshin_N
CALCOCO1
Motif
Other DBs
NCBI-GeneID:
100259525
NCBI-ProteinID:
XP_002282789
UniProt:
D7SUW3
LinkDB
All DBs
Position
4:join(5179432..5180779,5181297..5181770,5181874..5182175,5188153..5188878,5189195..5189473,5189671..5189832,5189951..5190889,5190993..5191208,5197926..5198186,5198572..5198916)
Genome browser
AA seq
1683 aa
AA seq
DB search
MKQHHTSSEAVSSSSTISSSTVPSSSEQSQPPIATPSPSPSMGDDPSLAASRDGHGQESV
TVDRRTDFSAVCKWTVHNFPKIKARALWSKYFEVGGFDCRLLIYPKGDSQALPGYISVYL
QIMDPRGSSSSKWDCFASYRLAIVNHADDSKSIHRDSWHRFSSKKKSHGWCDFTPSTTLF
DSKSGYLFNNDSVLITADILILNESVNFTRDNNELQSASSMASMVVAGPVSDVLSGKFTW
KVHNFSLFKEMIKTQKIMSPVFPAGECNLRISVYQSSVNGVEYLSMCLESKDTEKAVVSD
RSCWCLFRMSVLNQKPGLNHMHRDSYGRFAADNKSGDNTSLGWNDYMKMSDFIGSDSGFL
VDDTAVFSTSFHVIKEFSSFSKNGGLIGVRGGSGGTRKSDGHLGKFTWRIENFTRLKDLL
KKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSH
RLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVVFSAEVL
ILKETSTMLDLTDQDSESSNSGSQIDKIGKRSSFTWRVENFMSFKEIMETRKIFSKFFQA
GGCELRIGVYESFDTICIYLESDQSVGSDPDKNFWVRYRMAVVNQKNPAKTVWKESSICT
KTWNNSVLQFMKVSDMLEADAGFLVRDTVVFVCEILDCCPWFEFSDLEVLASEDDQDALT
TDPDELIDSEDSEGISGDEEDIFRNLLSRAGFHLTYGDNPAQPQVTLREKLLMDAGAIAG
FLTGLRVYLDDPAKVKRLLLPTKLSGSNDGKKVTKTDESSPSLMNLLMGVKVLQQAIIDL
LLDIMVECCQPSEGNSNDDSSDENSKLSPGGSGAVSPLESDRENGATESAEFPVYERLDS
GVYESTNVSAVQSSDMNGTVVPEKAVPGQPISPPETSAGGSIENASLRSKTKWPEQSEEL
LGLIVNSLRALDGAVPQGCPEPRRRPQSAQKIALVLDKAPKHLQPDLVALVPKLVEHSEH
PLAACALLDRLQKPDAEPALRIPVFGALSQLECGSEVWERILFQSFELLSDSNDEPLAAT
INFIFKAASQCQHLPEAVRSIRVKLKHLGAEVSPCVLDFLNKTVNSWGDVAETILRDIDC
DDDFGDNCSTIPCGLFLFGENGPTSERLHAIDEQAFCATRHFSDIYLLIEMLSIPCLAVE
ASQTFERAVARGAFVAQSVAMVLESRLAQRLNFNSRFVAESFQHTDVVVEGETNEQLRAQ
RDDFSSVLGLAETLALSRDPRVKGFVKVLYTILFKWYADESYRGRMLKRLVDRATSTTDS
SREIDLELEILVILVCEEQEIVRPVLSMMREVAELANVDRAALWHQLCTSEDEIIRMREE
RKAEISNLVKEKAIISQRLSESEATSNRLKSEMRAEADRFAREKKELSEQIQEVESQLEW
LRSERDEEITKLTSEKKVLQDRLHDAEAQLSQLKSRKRDELKRVVKEKNALAERLKSAEA
ARKRFDEELKRYATENVTREEIRQSLEDEVRRLTQTVGQTEGEKREKEEQVARCEAYIDG
MESKLQACQQYIHTLEASLQEEMSRHAPLYGAGLEALSMKELETLARIHEEGLRQIHAIQ
QHKGSPAGSPLVSPHTLQHSHGLYPPAPPPMAVGLPPSLIPNGVGIHSNGHVNGAVGSWF
NHN
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagcatcacacttcctcagaagcagtatcctcatcgtcaacgatatcatcgtcg
acagtaccatcatcatcggagcaatcgcagccgcccatcgccactccgtcgccgagtcca
tcaatgggcgacgatccctccctggccgcctctagagacggccacggccaagaatcggtg
accgtcgatcgccgcaccgacttctccgccgtctgcaaatggacggttcacaatttcccc
aaaatcaaagctagggcactgtggagcaagtacttcgaagtcggtggcttcgattgtcgt
ctcctaatctaccctaaaggcgactctcaggctttgcctggctacatcagcgtctatctc
caaatcatggaccctcgcggctcatcgtcctccaaatgggactgcttcgccagctaccgc
ctcgcaatcgttaatcacgccgacgattccaagtctatccaccgcgattcgtggcaccgg
ttctccagtaagaagaaatcgcacggttggtgcgatttcaccccctccactacgcttttc
gattccaagtctggttatttgttcaacaatgactccgtcctcataaccgccgatattctt
atattgaatgaatccgtaaatttcactcgcgataataatgaattgcaatcggcctcatcc
atggcttccatggttgtggccggtccggtgtcggatgtgttgagtggaaaatttacttgg
aaagtacataattttagtctattcaaagaaatgataaagacccaaaagataatgagtccc
gttttcccagcaggagagtgtaatcttaggattagtgtctaccaaagttcggttaatggg
gttgagtatttgtccatgtgtttggagagtaaggatacggagaaggcagtggtgtctgac
cggagttgttggtgtttgtttcggatgtcagttttgaaccagaaaccggggttgaatcac
atgcatagggactcgtatggtaggtttgcagcggataataagagtggggacaatactagt
ttggggtggaatgattatatgaaaatgtcagattttattggatcagattcagggtttttg
gttgatgatactgcagtctttagtacatcctttcatgtgattaaggagttcagcagtttt
tcaaagaatgggggtttgattggggtaaggggtggaagtggtggcacacggaagtctgat
gggcatttggggaaattcacttggaggattgagaacttcacaaggttgaaagatcttcta
aagaagaggaagattacgggtttgtgcatcaagagcaggaggtttcagattgggaatcgt
gattgtcgcctgattgtttatcctcgagggcagtctcagccaccatgccacctttcagtc
tttctcgaggttacagattcacgaaatacttccagtgattggagttgttttgtgagccac
cgattgtcggttgtgaaccaaaggatggaagacaagtctgttaccaaggaatctcaaaac
cgctactcaaaagctgcaaaggactggggctggcgagaatttgtgacactcactagtctc
tttgatcaagattctggatttcttgttcaggacactgttgtgttctctgcagaggttctt
attttgaaagagacatccacaatgctggacttgactgatcaagacagtgagtcaagcaac
agtggttcccagattgataagattgggaaaagaagttcatttacatggagagtggaaaat
ttcatgtccttcaaggaaataatggaaactcgaaaaatttttagcaaattctttcaagct
ggtggatgtgagcttcgaattggtgtctatgaatcctttgacaccatatgcatatacctc
gagagtgatcaatcagttgggagtgatcctgataaaaatttttgggtcagatacaggatg
gctgtggtgaatcaaaagaaccctgccaaaactgtgtggaaggagtcctctatttgcaca
aagacatggaataattccgttcttcaattcatgaaggtatcggatatgctggaggcagat
gcaggatttcttgtacgtgacacagttgtttttgtttgtgaaatcttggattgctgtccg
tggttcgaattttcagacctagaggttttggcttccgaggatgaccaggatgctttaacc
actgaccctgatgaactcattgattcagaagacagtgaaggaataagtggagatgaagaa
gacatctttagaaaccttctttccagagctggctttcacctcacatacggagataatcct
gcacaaccacaggtcactttgagagaaaagcttctaatggatgctggtgccatagctggt
ttcctgactggacttcgtgtttatctcgatgaccctgctaaggtaaagcgcttgcttctt
ccaaccaaactctctggcagcaatgatggaaagaaagtcacaaagactgatgaatcttcc
cccagtttgatgaacttgttgatgggagttaaagtgttgcagcaggcgattattgattta
cttttggatataatggttgaatgttgccaaccttcagaaggaaattctaatgatgattct
tctgatgaaaactcaaaactttctcctggtggcagtggagctgtcagcccactggaatca
gatcgggaaaatggagcaacagaatctgcagaattccctgtatatgagagattggattct
ggggtatatgaaagtaccaatgtgtctgctgtacaaagctcagacatgaatggtactgtt
gtacctgaaaaagctgttcctggacagcctataagtccaccagagacatctgcagggggt
tccatcgaaaatgcttcccttcgctcgaagaccaagtggccagagcaatctgaggaacta
ttgggattgattgtgaattcactgagagccctagatggcgcggttccacaaggttgtccc
gagccaaggcgacggccccaatctgcacaaaagattgctcttgtattggataaagctccc
aagcacctgcaaccagacctagttgctttggtacccaaattggttgagcactcagagcat
ccacttgctgcttgtgcacttctggatcgacttcagaagccagatgctgaacctgcattg
cggataccggttttcggggctcttagtcaactggagtgtggcagtgaagtttgggaacgc
attttattccaatcttttgagcttttgagtgactcaaatgatgaaccactggcagcaacc
ataaatttcatctttaaagcagcatctcaatgccaacatcttcctgaagcagtcagatct
atacgtgttaagctaaaacatctaggtgcagaagtgtctccttgtgtccttgattttttg
aataaaactgtaaatagttggggagatgttgctgaaacaatactgagagatattgattgt
gacgatgattttggtgacaattgctcaacaattccttgtgggcttttcttatttggtgaa
aacgggcctacttccgaaaggttgcatgcaattgatgaacaggctttctgtgctactcgg
catttttcagatatctatctcctgattgagatgttatcgataccttgccttgctgttgaa
gcttcccaaacatttgagagagctgtagctcgaggggcctttgtggcccagtcagtcgcc
atggtcttggaaagtcgccttgctcaaagattgaattttaattccagatttgttgctgaa
agttttcagcacacagatgttgtagtagaaggagaaaccaatgagcagctaagagctcaa
cgagatgatttttcttcagttctcggtcttgctgagacattggctctctctcgagatcct
cgtgtaaagggatttgtcaaggtgctttacactatattgtttaaatggtatgctgatgaa
tcatacagaggcaggatgcttaagagacttgttgatcgcgccaccagcactacagacagt
agtcgtgaaatagatttagaattggaaattttggttattttggtttgtgaagaacaagaa
attgttagaccagttctgagcatgatgcgtgaggttgctgaacttgcaaatgttgatcgg
gcagctctttggcatcaattgtgcaccagtgaagatgaaattattcgcatgcgtgaagag
aggaaagctgaaatttccaatttggttaaagaaaaagctatcatatcacaaaggcttagt
gaatctgaggctaccagcaaccgtcttaagtctgaaatgagggctgaggcggatcggttt
gctcgagaaaaaaaggagctttctgaacagatacaagaagttgaaagtcagctagaatgg
cttcgatcagagcgggatgaagaaattacaaagctaacttcagagaagaaagttcttcag
gatcgccttcatgatgcagaggcacaactttcacagttgaagtctcgaaaacgcgatgaa
ttgaagagagtagtgaaggaaaaaaatgctcttgctgaaaggttgaagagtgctgaagct
gcaaggaaaaggtttgatgaagaactaaaacgttatgcaacagagaatgtgacaagagag
gaaattcgacagtcacttgaagatgaagttcgacggttgacacaaacagttggccaaact
gaaggagaaaagcgggagaaggaagagcaggttgctcgatgtgaagcatacattgatgga
atggaatcaaaattgcaagcctgccagcaatatattcacaccctcgaggcttcgctccag
gaggaaatgtcccgacatgctcctctatatggtgctggtttggaagcactatcaatgaag
gaactggagacattggcccgtatccatgaagaagggcttaggcagattcatgccatccaa
cagcacaaagggagtccagctggcagtcctcttgtgagccctcacacccttcagcactcc
catgggctgtaccctcctgcaccacctccaatggctgttggattgcccccttctctcatt
ccaaatggtgttgggatccacagcaatgggcatgtgaatggggcagttggatcctggttc
aaccataattga
DBGET
integrated database retrieval system