KEGG   Vitis vinifera (wine grape): 100262322
Entry
100262322         CDS       T01084                                 
Name
(RefSeq) rRNA biogenesis protein RRP5
  KO
K14792  rRNA biogenesis protein RRP5
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vvi03009]
    100262322
Ribosome biogenesis [BR:vvi03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    100262322
SSDB
Motif
Pfam: S1 Suf NRDE-2
Other DBs
NCBI-GeneID: 100262322
NCBI-ProteinID: XP_010653854
UniProt: F6HLF1
LinkDB
Position
8:join(21966834..21966999,21967157..21967368,21967873..21968013,21968235..21968408,21969073..21969172,21971532..21971644,21971751..21971873,21971995..21972066,21972804..21972896,21973982..21974095,21974191..21974313,21976349..21976534,21976718..21976792,21979047..21979183,21980604..21980738,21982061..21982206,21982296..21982361,21983476..21983582,21983770..21983850,21983950..21984024,21984110..21984211,21991397..21991565,21991654..21991793,21992194..21992277,21992377..21992477,21992721..21992874,21992975..21993049,21993205..21993355,21994033..21994706,21995620..21995765,21995855..21996038,21996215..21996313,21996471..21996814,21996909..21997085,21997616..21997712,21997792..21997947,21998029..21998259,21998335..21998418,21998523..21998630)
AA seq 1904 aa
MAPPSKKSHPKKSKRDDKLRGASKKPFKPRMRQNEAVPSESLALQMEDDVPDFPRGGGSL
LSRQEHDAIRAEVDAEFEAGERKTKKKNKNAKKTKKNYALEDDMGSLFGDGITGKLPRFA
NKITLKNISPGMKLWGVVAEVNEKDLGISLPGGLRGLVRASEAFDPLFSNEIKDAEGIFL
PRIFHIGQLVSCVVLQLDDDKKEKGKRRIWLSLRLSLLHKGFTLDALQEGMVLTAYVKSI
EDHGYILHFGLPSFTGFLPKSSQAENIEINTGQILQGVIRSIDKAHKVVYLSSDPDTISK
CVTKDLKGISIDLLIPGMMVNARVQSTFENGVMLSFLTYFTGTVDIFHLQTTFPSSNWKD
DYNQNKKVNARILFIDPSTRAVGLTLNPHLVNNKAPPCPVKTGDIYDHSKVIRVDRGLGL
LLEVPSTPASTPTYVTLFDVADEEVRKMEKKYKEGSHVRVRILGFRNLEGLAMGTLKASA
FEGSVFTHSDVKPGMVVKAKVIAVDSFGAIVQFPSGVKALCPLRHMSEFDIVKPRKKFKV
GAELIFRVLGCKSKRITVTHKKTLLKSKLGIISSYTDATEGLITHGWITKIEKHGCFIRF
YNGVQGFAPSSELGLEPGCNTSLMYHVGQVVKCRVKGSVPASRRINLSFIIKPTRISEDD
MVKLGSVVGGVVDRVTPHAIIVNVSAKGYLKGTISTEHLADHQGHAALMKSTLKPGYEFD
QLLVLDVEGNNFILSAKYSLINSAQQLPLDLTQIHPNSVVHGYICNIIETGCFVRFLGRL
TGFSPRNKVMDDQRAVPSEAFFIGQSVRSNILDVNSETGRITLSLKQSCCSSTDASFIQE
YFLLEEKIAKLQLSDSEHSELKWAEGFNIGTVIEGKIHDAKDFGVVISFEKYNDVFGFIT
HYQLTAERGSTVQAVVLDVAKTERLVDLSLKPEFLDRHKEDSSNSQAGKKKRRREAYKEL
QPHQTVNAIVEIVKENYLVLSLPEYNYAIGYASVSDYNTQKFAQKQFLHGQSVIASVMAL
PSPSTVGRLLLVLKSVSEATETSSSKRAKKKSSYNVGSLVQAEITEIKPLELRLKFGIGF
HGRVHITEVCDENVIENPFSNFRIGQTVSARIVAKANKSENNGKNHQWELSIKPEMLTGS
IEVENKLVDAEFRISTGQRVTGYVYKVENEWIWLTISRHIKAQLFLLDTSCEPNELQEFQ
KRFEVGKAVSGYVLSANKEKKLLRMVLHQFSVSNGTLDGKVLNIDNQHCNPPIENLIPHI
HKGDTLGGRISKILPGVGGLLVQIGPHLYGKVHFTELKDSWVSDPLSGYHEGQFVKCKVL
EIGHSEKGTVHVDLSLWSSLNGMHSPNSRVEKIDNLHSDMLVQGYVKNVTSKGCFILLSR
KLDARILLANLSDGYVEKPEREFPIGKLVSGRVLSVEPLSRRVEVTLKTSSATSVQKSEV
NDFSSILVGDIIFGTIKRVESYGLFITIDDTNMVGLCHISELSDDHISNIETKYKAGERV
AAKILKVDEERHRISLGMKNSYIKETTQNNGFVDDTQLSTFLENNSREIQNLDVEYEDEE
YPVLSQVESRASILPLEVDLDDVNHSNLDDAVGQNHIYTNETNTIDEKSKRRAKKKAKEE
KEQEIRAAEERLMLNDVPRTADEFEKLVRGSPNSSFLWIKYMALMLSLADIEKARSIAER
ALRTINIREESEKLNIWMAYFNLENEYGNPPEEAVVKVFQRALQYCDPKKVHLALLGMYE
RTEQHKLADELLEKMTKKFKHSCKVWLRRVQNVLKQHQDGVQPVINRALLCLPRHKHIKF
ISQTAILEFKSGVPDRGRSMFEGMLREYPKRTDLWSVYLDQEIRLGDIDIIRALFERAIN
LSLEPRKMKFLFKKYLEYEKSQGDEERIESVKRKAMEYANSTLA
NT seq 5715 nt   +upstreamnt  +downstreamnt
atggcaccgccgtccaagaaatcgcatccgaaaaaatcaaaacgagatgataaacttcgc
ggagcctccaaaaaaccgtttaaacccagaatgagacagaacgaggccgttccatcggaa
tccctagctctccagatggaagacgacgtcccggatttccccagaggtggtgggagtttg
ctgagtcggcaagagcacgatgcaattcgtgccgaagtcgatgcagaatttgaagctggg
gagaggaagacgaagaaaaagaataagaatgcaaagaagaccaagaagaactatgcactg
gaggatgatatgggttcactttttggtgacggcatcactggaaaattacctaggtttgca
aataagatcactttgaagaatatatctcccggaatgaagctctggggagtcgttgctgaa
gtaaatgagaaagaccttggtattagtcttccaggtggcttacgtggattagttcgtgca
agtgaagcatttgatcccctttttagtaatgaaattaaggatgctgaaggtattttcctt
cctagaatatttcatattgggcagctagtttcttgtgttgtgttgcaattggatgatgac
aagaaagagaaggggaaacgaaggatttggctttctttgcgcctctccttgttgcacaag
ggcttcaccttggatgcccttcaggaaggaatggtccttactgcatatgtcaaaagcatt
gaagatcatggctacattcttcattttggattgccttcattcactggattcttgccaaag
agcagccaagctgagaatatcgagattaacactgggcaaattttacaaggggtcatcaga
agcattgataaagcccataaagtggtttacttgagttctgaccctgatacaatttctaaa
tgtgtgactaaggatctgaagggtatctcaatcgatcttctcattccaggcatgatggtt
aatgctcgtgtgcagtcaacttttgaaaatggggttatgttatcatttcttacatacttc
acaggaactgttgatatatttcatttgcaaacgactttcccttcctcaaactggaaggat
gactacaatcagaataagaaggttaatgctcgaatattatttattgatccctcaactaga
gctgttggtttgaccctgaatcctcaccttgttaataacaaggctcctccttgtcctgtt
aaaaccggtgatatctatgaccactcaaaagtaatcagagttgacagaggattgggcctt
ctgcttgaagtcccttctactccagcttcaactccaacatatgttactttatttgatgtg
gctgatgaggaagttcggaaaatggagaagaagtataaggaaggtagccatgttcgtgtt
cgaattcttgggtttagaaacttggaagggcttgctatggggactttaaaggccagtgct
tttgaaggttcagtattcacccactcagatgtcaagcctggcatggtagtgaaagcaaaa
gttattgctgttgatagttttggtgctatagtgcagttccccagtggtgtaaaggcgctc
tgccctcttcggcatatgtctgagtttgatattgtgaagcctaggaaaaaattcaaggtt
ggagctgaattgatattccgtgtgctcggttgcaagtccaagagaataactgttactcac
aagaaaacccttttgaaatcaaagcttggaattattagttcatacactgatgctactgaa
ggattaattacacatggatggataacaaagattgagaaacatggatgctttatccgattc
tataatggagtccaaggatttgccccgagttccgaacttggattagaaccaggatgcaac
acaagtttgatgtatcatgttgggcaagttgtcaaatgcagagtaaaaggttctgttcct
gcttcacggcggatcaaccttagtttcattataaaaccaacaaggatttctgaagatgat
atggttaagttgggtagcgtggttggaggagtagttgaccgggtgacccctcatgcaata
attgtaaatgttagtgcaaaaggttacttgaagggtacaatttctactgagcatttggct
gatcatcaaggacatgctgctttgatgaagtcgacacttaaacctggatacgagtttgat
caactattggttctagatgttgaaggtaacaattttatactctctgccaagtattctctt
atcaattctgcccaacagctccctctggatctcactcagattcatccgaactcagtagtc
catgggtacatttgtaacataattgaaactggctgctttgtccgcttccttgggcgtttg
actggattctctcctagaaacaaggtgatggatgaccaaagagctgttccttccgaagcc
tttttcattgggcaatctgttcggagtaatatacttgatgtgaacagtgaaacaggtaga
ataacactttctttgaagcagtcatgttgctcatcaacagatgcatcatttatacaagaa
tattttcttttggaggagaagattgctaagcttcagttatcagactccgaacactctgag
ttaaaatgggctgagggctttaatattggcaccgtcattgaaggaaagattcatgatgca
aaagattttggagttgtcatcagctttgagaagtataatgatgtttttggttttatcaca
cactatcaattaacggcggaaagaggttccacagttcaagctgtcgttcttgatgttgcc
aagacagaacgccttgtggatttatctttaaagccagagtttcttgatagacacaaggaa
gacagttctaacagccaggctggcaaaaagaaacgcagaagagaagcatacaaggagttg
caaccacatcaaactgtaaatgcaattgtggaaattgtgaaagaaaattacttggttctt
tcattgccagagtataactatgctataggatatgcctctgtgtctgactacaacacacaa
aagtttgctcagaaacaatttcttcatgggcaaagtgtcattgctagtgttatggcactt
ccaagcccctcaacagttggaaggttgcttttggttcttaaatctgttagtgaggctaca
gagacttccagttcaaaaagggccaaaaagaaatccagctataatgtgggatctctggtt
caagcagagattactgaaataaagcctcttgagttaaggttgaaatttggaattggtttc
catgggagggttcatataacagaggtatgtgatgaaaatgttattgagaatccctttagt
aactttaggattgggcaaacagtgtctgcaagaattgttgcaaaagccaataaatcagaa
aataatggtaaaaaccaccaatgggagctgtccatcaaaccagagatgcttacaggttcc
attgaagttgagaacaagcttgtggatgcagaattcaggatttcaactggacaacgggta
actggttatgtgtataaagtggaaaatgaatggatctggttaacgatatcgcgtcatatc
aaggctcagctatttctacttgacacttcatgtgaacctaatgaacttcaagaattccag
aagcgctttgaagtgggaaaagctgtttctggttatgttttaagtgccaataaggagaaa
aagctattgcgcatggtgctacatcagttctccgtctctaatggaacacttgatggcaaa
gttttaaatattgataatcaacactgcaaccctcctattgagaacttgattccccatatt
cataaaggagatactctcggtggtagaatttccaaaatacttccaggtgttggtggattg
cttgtccaaattggtcctcatctgtatggtaaggttcattttactgaacttaaggactct
tgggtgtctgacccattgtccggttatcatgaagggcagtttgtaaaatgcaaggtcctg
gaaataggccattcagagaagggtactgtccatgttgacttatcactatggtcatcctta
aatggcatgcattcacctaacagccgcgtagaaaagatagacaatcttcattctgatatg
cttgtgcagggatatgttaagaatgttacctcaaaaggatgttttattttgctttcccgg
aagcttgatgctagaatcctccttgcaaatttatctgatggatatgttgaaaaacctgaa
agagaatttcctattggaaaacttgtaagcggaagggtgttatctgtggagcctttgtct
cggcgagttgaagtcaccctcaagacgtcaagtgcaactagtgtgcaaaaatctgaagta
aatgattttagtagcatccttgttggagatattatttttggcacgattaagagggttgag
tcatatggtttatttataaccattgatgacacaaacatggttgggttgtgccatatttca
gagctttcagatgatcatattagcaacattgagactaaatataaagctggggagagagtt
gcagcaaagatcttaaaggtggatgaggaaaggcaccggatttctcttggaatgaagaat
tcatatattaaagaaacaacccaaaataatggttttgttgatgacactcaattgtcaaca
tttctggaaaacaactctcgtgaaatccaaaatttggatgttgaatatgaagacgaagag
tacccagttctttcacaagtggagtcaagggcctcaattcttccacttgaggttgatctt
gatgatgtaaatcactccaatttggatgatgcagttggtcaaaatcatatttatactaac
gagacaaacaccatagatgagaaaagcaagagacgggccaagaaaaaagccaaggaagaa
aaggagcaagaaattagggctgctgaggaacgactaatgctgaatgatgtgccaagaact
gccgatgagtttgaaaagctggttagaggttcccctaatagcagctttctatggataaaa
tacatggctttgatgctgtctttggctgatattgagaaagctcgctcaatcgctgaaagg
gctttgagaacaataaatatcagggaagagtctgagaagttgaatatttggatggcgtat
tttaatttagaaaatgaatatgggaatcctccagaggaagctgttgtgaaggtatttcaa
agagcattgcagtattgtgatcctaaaaaggtgcatctagcactcttaggcatgtatgaa
aggactgagcaacataagttagcagacgagcttcttgagaaaatgaccaagaagttcaag
cattcatgcaaagtttggttaagaagggtgcagaatgtcttgaagcagcaccaagatgga
gttcaacctgttataaatcgggctcttttatgtcttccccgccataagcatattaaattc
atctcacagactgctatccttgaattcaaatcaggggttcctgatagaggacgatccatg
tttgaagggatgctgcgggagtacccgaagagaacagacttgtggagtgtctaccttgat
caagaaattcgacttggagatattgacattattcgtgcactatttgagagggcaattaac
ctcagccttgaacccagaaaaatgaagttcttattcaagaagtacctcgagtatgagaag
tctcagggtgatgaggaacggattgaatctgtaaagaggaaggcaatggagtatgccaac
agcacacttgcttaa

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