Entry
Name
(RefSeq) endonuclease III homolog 1, chloroplastic isoform X1
KO
Organism
vvi Vitis vinifera (wine grape)
Pathway
Brite
KEGG Orthology (KO) [BR:vvi00001 ]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100268015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:vvi03400 ]
100268015
Enzymes [BR:vvi01000 ]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
100268015
DNA repair and recombination proteins [BR:vvi03400 ]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
100268015
Prokaryotic type
100268015
BRITE hierarchy
SSDB
Ortholog Paralog Gene cluster GFIT
Motif
Motif
Other DBs
LinkDB
All DBs
Position
5:complement(join(23771723..23771866,23772676..23772759,23773523..23773627,23773722..23773859,23774080..23774171,23775244..23775310,23775497..23775615,23776094..23776162,23777482..23777545,23778623..23778747,23778875..23778998))
Genome browser
AA seq
376 aa AA seq DB search
MSHILLKSCTLALASVRITWPMSRATSSSKPLLPALQSKTSAHEETPNGVSGSEVRVFVR
KKRVKMAVETPEKEIKAEPQQQKICELPDIEEFTYRKGKRSTHLRKSKPTSDVPPGGTEI
TSSIRPAAELPANWEKILEGIRKMRSSEDAPVDSMGCEKAGSSLPPRERRFAVLVSSLLS
SQTKDNVTHGAIQRLLQNGLLVADAIDKADEATVKSLIYPVGFYSRKAGNLKKIAKICLM
KYDGDIPSSLEELLLLPGIGPKMAHLVMNVAWNNVQGICVDTHVHRICNRLGWVSRRGTK
QKTSLPEETRESLQLWLPKEEWVPINPLLVGFGQTICTPLRPRCGVCGVSDLCPSAFKEA
QSPSSKMKKPGTDKKL
NT seq
1131 nt NT seq +upstream nt +downstream nt
atgtctcacattctcctcaaaagttgcacccttgcattggcttctgtccgcattacctgg
cccatgtccagagcaacctcttcttccaaaccccttcttccagcccttcaatccaaaact
tcagctcatgaagaaacccccaatggcgtttctgggtccgaggttcgtgtttttgttagg
aaaaagagagtgaaaatggctgttgaaaccccagaaaaggagattaaagctgaacctcaa
cagcagaaaatctgtgaactacctgacattgaagagttcacttacagaaagggcaaaaga
tctacccatttaaggaagtcaaaacccacctctgacgtgcctccaggaggaactgaaatt
acttcttccattaggccagcagctgaactacctgccaattgggaaaagatccttgaaggg
attcgtaaaatgaggtcttctgaagatgcaccagtagattcaatgggttgtgagaaagct
ggcagctctcttcctccaagggaaagaagatttgctgtcttggtgtcttcacttctatca
agccaaaccaaggataatgttactcatggagcaatacagcggctccttcaaaatggtctg
cttgttgctgatgccattgacaaggctgatgaagcaactgtcaagagcttgatttacccg
gttggattttactcgaggaaagctggtaaccttaaaaaaattgcaaaaatctgtctcatg
aaatatgatggagatataccaagttcattggaagagttgctcttacttccagggataggt
ccaaagatggctcatttggtcatgaacgtggcttggaacaatgtccaagggatttgtgtt
gatactcatgtgcaccgcatttgtaataggcttggatgggtgtcacggcgaggaacaaag
cagaaaacttcattgcctgaggaaacaagagagtcgttgcaactgtggcttccaaaagaa
gaatgggttccaattaatcctcttttggtgggatttggacagacaatatgcactcctctc
agacctcgctgtggagtgtgtggtgtaagcgatctctgcccatctgcattcaaggaggca
cagagcccatcatccaagatgaagaagcctggtacagacaagaaactttga