KEGG   Vitis vinifera (wine grape): 100268015
Entry
100268015         CDS       T01084                                 
Name
(RefSeq) endonuclease III homolog 1, chloroplastic isoform X1
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100268015
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vvi03400]
    100268015
Enzymes [BR:vvi01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     100268015
DNA repair and recombination proteins [BR:vvi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     100268015
 Prokaryotic type
     100268015
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S DUF2400
Other DBs
NCBI-GeneID: 100268015
NCBI-ProteinID: XP_002264475
LinkDB
Position
5:complement(join(23771723..23771866,23772676..23772759,23773523..23773627,23773722..23773859,23774080..23774171,23775244..23775310,23775497..23775615,23776094..23776162,23777482..23777545,23778623..23778747,23778875..23778998))
AA seq 376 aa
MSHILLKSCTLALASVRITWPMSRATSSSKPLLPALQSKTSAHEETPNGVSGSEVRVFVR
KKRVKMAVETPEKEIKAEPQQQKICELPDIEEFTYRKGKRSTHLRKSKPTSDVPPGGTEI
TSSIRPAAELPANWEKILEGIRKMRSSEDAPVDSMGCEKAGSSLPPRERRFAVLVSSLLS
SQTKDNVTHGAIQRLLQNGLLVADAIDKADEATVKSLIYPVGFYSRKAGNLKKIAKICLM
KYDGDIPSSLEELLLLPGIGPKMAHLVMNVAWNNVQGICVDTHVHRICNRLGWVSRRGTK
QKTSLPEETRESLQLWLPKEEWVPINPLLVGFGQTICTPLRPRCGVCGVSDLCPSAFKEA
QSPSSKMKKPGTDKKL
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgtctcacattctcctcaaaagttgcacccttgcattggcttctgtccgcattacctgg
cccatgtccagagcaacctcttcttccaaaccccttcttccagcccttcaatccaaaact
tcagctcatgaagaaacccccaatggcgtttctgggtccgaggttcgtgtttttgttagg
aaaaagagagtgaaaatggctgttgaaaccccagaaaaggagattaaagctgaacctcaa
cagcagaaaatctgtgaactacctgacattgaagagttcacttacagaaagggcaaaaga
tctacccatttaaggaagtcaaaacccacctctgacgtgcctccaggaggaactgaaatt
acttcttccattaggccagcagctgaactacctgccaattgggaaaagatccttgaaggg
attcgtaaaatgaggtcttctgaagatgcaccagtagattcaatgggttgtgagaaagct
ggcagctctcttcctccaagggaaagaagatttgctgtcttggtgtcttcacttctatca
agccaaaccaaggataatgttactcatggagcaatacagcggctccttcaaaatggtctg
cttgttgctgatgccattgacaaggctgatgaagcaactgtcaagagcttgatttacccg
gttggattttactcgaggaaagctggtaaccttaaaaaaattgcaaaaatctgtctcatg
aaatatgatggagatataccaagttcattggaagagttgctcttacttccagggataggt
ccaaagatggctcatttggtcatgaacgtggcttggaacaatgtccaagggatttgtgtt
gatactcatgtgcaccgcatttgtaataggcttggatgggtgtcacggcgaggaacaaag
cagaaaacttcattgcctgaggaaacaagagagtcgttgcaactgtggcttccaaaagaa
gaatgggttccaattaatcctcttttggtgggatttggacagacaatatgcactcctctc
agacctcgctgtggagtgtgtggtgtaagcgatctctgcccatctgcattcaaggaggca
cagagcccatcatccaagatgaagaagcctggtacagacaagaaactttga

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