Vibrio vulnificus CMCP6: VV2_1360
Help
Entry
VV2_1360 CDS
T00108
Symbol
fdhA
Name
(GenBank) formate dehydrogenase, alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
vvu
Vibrio vulnificus CMCP6
Pathway
vvu00630
Glyoxylate and dicarboxylate metabolism
vvu00680
Methane metabolism
vvu01100
Metabolic pathways
vvu01120
Microbial metabolism in diverse environments
vvu01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
vvu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VV2_1360 (fdhA)
09102 Energy metabolism
00680 Methane metabolism
VV2_1360 (fdhA)
Enzymes [BR:
vvu01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
VV2_1360 (fdhA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Pyr_redox_2
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Fer2_4
NAD_binding_8
Fer4_7
Pyr_redox_3
Fer4_6
Fer4
Fer4_10
Fer4_9
Fer4_2
Fer4_16
DAO
Thi4
Fer4_21
Fer4_8
FAD_oxidored
NAD_binding_7
Amino_oxidase
HI0933_like
Fer4_15
FAD_binding_2
Fer4_4
NADH-G_4Fe-4S_3
Fer4_3
FAD_binding_3
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
AAO08247
UniProt:
A0A3Q0L089
LinkDB
All DBs
Position
II:1501582..1505781
Genome browser
AA seq
1399 aa
AA seq
DB search
MIQIVIDGKYRIVEAGQTVLQAAKVCGVEIPSLCGMNRSGEKIPCDLCVVEVESGGTRRA
CELEVYNGLTVNTQSEALSAHRKQALNRIMSDHYADCEAPCKTACPAGVDIQSYLYHIAQ
NDHQKAIEVIKRTLPMPLSIGRVCPAFCESECRRSLVDDAIAIRQLKRHAADADLAAQEA
YTPEKKADKNKRIAIVGSGPGGLTAGYYLTNEGYQVDVFEAMPQAGGWLRYGIPEYRLPK
SILDKEIALMCRNGMAIHTDKKLGRDISLSQLSQDYDAVCLAVGASKAVAMDYPGSDLDG
CYLGVDYLKDFVTEQRFTTGKKVAVIGGGNTAIDCARTAVRTGADTTLIYRRTRDEMPAE
DYEIEEAEHEGVKFHFLTNPAQNIADGDGRVCSVKLEKMALGAPDASGRRRPEATGEYFT
EAFDTVIAAVSQQADLSFMQGEALTLPLTRWNTADANPETMHSGTGNIFSIGDFRRGPAT
AVEAVADGRIAAQAIDRFFDGDMENIPLKPFNSRKEQKLKQVDPLHFSHLQKVARTIMPE
LTSQQREQSFEEVELGFDNAEAMAEAARCLECGCQVNTSCDLRDYATEYGAEQHFHYSVN
IKSHDEWQALRQNDPRHKYPIDHSSEFIVFDANRCISCGQCIQACREQSVQGVLSFMNLE
KGRPVVRPDCRPNFGGQGVRMGDSRCVQCGACVQACPVGAMTDARDRSQGRETPLKKVDT
ICTYCGVGCKLTMHVDEAANRIRYVEGAHSPVNEGMLCVKGRYGFDFVASEERLTTPLIR
KDGWLQPASWQEAISLIADKFSTIKQDFGGRALAGFSSAKTTNEDNYAFQKFMRRELGTN
NVDHCARLCHASTVTGLEASLGSGAMTNDIPSIKHSDVIFIIGSDTSAAHPVIASHIKQA
VRHHGARLIVADPKRIGMADHAELYLAHRPGTDVMLINGVMQQIIKNGWYDMEYIEERVD
GFDTMLQEVMSPAYSLDKVELVTGVKANDIFAMARMIGTAKRTAVYYSMGITQHTTGHDN
VRSIANLQLLCGNIGIEGGGINPLRGQSNVQGACDMGALPNNYPGYQKVYNPLVREKFVI
EWDAPNLSAEPGLTLTEIIDGACRRDVRALYVMGENPVLSDPNQAHVIEGLEALDFLVVQ
DIFLTETAQYADVVLPSCSFAEKSGHFTNTERRVQRIYPAVNPPGEAKEDWRIIQEIANA
MGSDWHYRSVADITNEITRVTPQYAGLKWDNITREGVQWPSNKNNPAGTRIMHQTQFTRG
KGQMEAIPFRYAAELPDEEYPLVLTTGRVLEQFHTGTMTRKTQGLNNLAGPRAMISVQDA
EALGIGNGDMLKVSTRRGEIEIAAFVTKRMQAGVVFIPFHFVESPVNRLTTTATDPHAKI
PEFKVAAVRVEKLHTALVE
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgatccaaattgtcatagacggtaaataccgtatcgttgaggcggggcaaaccgttctg
caagccgccaaagtgtgtggggttgagattccgtctctgtgtggcatgaatcgttctggt
gagaagattccatgcgatttgtgtgttgttgaggtcgaaagtggcggcacccgccgtgct
tgtgagcttgaagtctacaacggcctaacggtaaacacgcaatccgaagcgctgtctgcg
catcgtaaacaggcgctcaaccgcatcatgagtgaccactacgccgactgcgaagcgccg
tgcaaaacggcgtgccctgcgggcgtggacattcaatcctatctttaccatattgcgcaa
aacgaccatcaaaaagcgattgaagtgatcaaacgtacgctgccgatgcctttgtcaatt
ggccgcgtttgtcctgcgttttgcgaatccgaatgtcgccgctcgctggtggatgatgcg
attgctatccgccaactgaaacgccacgctgcggacgctgatcttgctgcgcaagaagcc
tacacacccgagaaaaaagccgacaaaaacaaacgtattgcgattgtcggcagtggccct
ggtggtttaactgcgggctattacctcaccaatgaaggttatcaggtggatgtgtttgaa
gcgatgccacaagcgggtggttggctgcgttatggcattcccgagtatcgtctaccgaag
agcattctcgataaagagatcgcgttgatgtgtcgcaacggtatggcgattcatactgat
aaaaaactgggtcgagacatcagtttgtcgcagttaagccaagactatgatgcggtgtgt
ttggcagtgggtgcctcaaaagcggtggcgatggattacccgggtagcgatcttgatggt
tgttatttaggggtggattatctgaaagatttcgtcaccgagcagcgtttcaccacaggc
aaaaaagtggcggtgatcggtgggggtaacacggcgatcgactgcgcgcggacggcagtg
agaacgggggcggacaccacgttgatctatcgtcgtactcgcgatgaaatgcccgcggaa
gattacgaaatcgaagaagcagaacatgaaggcgtcaagtttcacttcctgaccaatcct
gcgcagaacatcgccgacggagatgggcgagtgtgctcagtgaagctggaaaaaatggcg
ttgggtgcgcccgatgcctctggtcgccgccgacctgaagcgacgggtgagtatttcacc
gaagcctttgataccgtgattgccgcagtttctcaacaagccgatttgagctttatgcaa
ggggaagcgttaacgctgcctctgactcgttggaacaccgctgatgcaaatccagaaacc
atgcacagtggcaccggcaatatcttcagtatcggtgattttcgccgtggcccagccact
gcagttgaagcggtcgcggatgggcgcatcgctgcgcaggccattgaccgtttcttcgat
ggtgacatggaaaatattccccttaagcccttcaattctcgtaaagagcagaagttgaaa
caggtcgacccgcttcatttttctcacctgcaaaaagtggcgcgcaccatcatgcctgag
ctgacctctcagcagcgcgagcaaagctttgaagaagtcgagttaggctttgataacgcc
gaagcgatggcggaagcggcgcgctgtttagaatgtggttgccaagtcaacacgtcgtgt
gacctgcgcgattacgccactgagtatggcgcggaacagcacttccactattcggtgaac
atcaaaagccatgatgagtggcaagcattgcgtcaaaacgatccacgtcataaatacccg
atcgaccacagttctgagtttattgtctttgatgcgaaccgctgtattagctgtggtcag
tgcattcaagcttgccgtgaacagtcagtgcaaggtgtattgagtttcatgaaccttgaa
aaaggtcgcccggtggtgcgtccggattgccgtccgaactttggtggtcagggagtgagg
atgggtgactcacgctgcgtgcaatgtggtgcctgtgtgcaagcgtgccctgtgggggcg
atgaccgatgcgcgcgatcgctcgcaaggccgcgaaacgcctttgaagaaagtggacacc
atttgtacctactgcggggtcggttgtaagttgaccatgcatgttgacgaagcggccaac
cgaattcgctatgtcgaaggggcacactcgccggtcaacgaaggcatgctgtgtgtcaaa
gggcgctatggtttcgattttgtcgccagtgaagagcggctcactacgccgttgatccgt
aaagatggttggttgcagccagccagttggcaagaagccatcagcttaattgcggataag
ttcagcaccatcaagcaagatttcggtggccgcgcattggcaggattctcatcggcgaaa
accaccaatgaagataactacgccttccagaaattcatgcgtcgtgaactgggtaccaac
aacgtcgatcactgtgcaaggctttgccacgcatcgaccgtcacgggattagaggcgtcg
ctgggcagtggtgcgatgaccaacgacattccaagcatcaagcactcggatgtcatcttc
atcattggttcggatacctcggcggcgcatccggtgattgcgtctcacatcaaacaagcg
gttcgacatcatggcgcgcgtttgattgtagcggaccccaaacgcatcggcatggcggat
cacgctgagctctatttggcgcatcgccccggcacggatgtgatgttgattaatggcgtg
atgcagcaaatcatcaagaatggctggtatgacatggagtacatcgaagaacgtgtcgat
ggctttgataccatgctgcaagaggtgatgtcgccggcctattctctcgacaaagtcgaa
ttggtgacgggcgtaaaagccaacgacatttttgccatggcccggatgatcggtaccgcg
aagcgcaccgccgtctactactcaatgggcatcacccagcacaccacggggcatgacaac
gttcgctctatcgccaatcttcaattactgtgtggcaacattggtatcgagggtgggggt
atcaacccattgcgcgggcagtcgaacgtgcagggcgcgtgcgatatgggcgcgttgcct
aataactacccgggctatcaaaaagtgtataacccattggtgcgcgagaaatttgtcatt
gaatgggatgcacccaatctctctgcggagccgggattgaccctaaccgaaatcatcgat
ggggcgtgccgccgtgatgtacgagcgctttatgtgatgggcgaaaaccccgtattgagc
gatcccaatcaggcgcatgtgattgagggattggaggcgctggatttcttggtggtgcaa
gacatcttcctcacggaaaccgcgcaatacgccgatgtggtcttgccttcttgctcgttt
gctgaaaaatcgggtcactttaccaatacggagcgccgtgttcagcgtatttatcctgcg
gtgaaccctcccggtgaagcaaaagaagattggcgaatcatccaagagatcgccaatgcg
atgggtagcgattggcactatcgttcggtggcggacatcaccaacgaaatcacccgcgtg
acgccacaatacgcagggctgaaatgggacaacatcacccgcgaaggcgtgcagtggccg
agcaacaaaaacaaccctgcaggcacgcgaatcatgcaccaaacgcagtttactcgtggc
aaaggccagatggaggcgatcccgtttcgctatgccgcagaactgcctgatgaagagtac
ccactggtgcttaccacagggcgtgttcttgagcagttccacaccggtaccatgacgcgc
aaaacgcagggcttgaacaatcttgcggggccacgagcgatgatcagcgtgcaagatgcc
gaggcgctcggcattggcaatggcgacatgctgaaagtctcaacccgtcgtggtgaaatt
gaaatcgcggcgtttgtcactaagcgtatgcaagcgggcgtggtgttcatcccgttccac
tttgttgagtcgccagtgaatcgactcaccaccacggcgaccgatcctcatgcgaagatc
cctgagttcaaagtggcggcggtacgcgtggagaaactgcacactgcgctggtggagtaa
DBGET
integrated database retrieval system
