Weissella tructae WS08: WS08_0600
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Entry
WS08_0600 CDS
T03228
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
wce
Weissella tructae WS08
Pathway
wce03420
Nucleotide excision repair
wce03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WS08_0600
03430 Mismatch repair
WS08_0600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wce03400
]
WS08_0600
Enzymes [BR:
wce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WS08_0600
DNA repair and recombination proteins [BR:
wce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WS08_0600
MMR (mismatch excision repair)
Other MMR factors
WS08_0600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
DUF5809
AAA_11
ResIII
DUF87
Motif
Other DBs
NCBI-ProteinID:
AIG65539
UniProt:
A0A075TVF2
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All DBs
Position
complement(682439..684733)
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AA seq
764 aa
AA seq
DB search
MTALLDGMNERQAEAVSTTEGPLMIMAGAGSGKTRVLTHRVAHLIQDLDVMPWRILAITF
TNKAAREMKERIGTLVSQNDADAVWVSTFHALAVRILRRDIDRLGYKRDFTIVDASAQKS
LVKRILKDMNVDTDKYDPRSVQGAISNAKNALLTPKLYAEQASGPFEDIVAKVYKEYQHQ
LSLAQSVDFDDLIMLTIDLLEKEPEVLNFYQEKFLYVHVDEYQDTNDAQYRLVTLLSGLH
RNLAVVGDSDQSIYGWRGANMQIMLDFTKDYPDAKTVMLEQNYRSTQTILDAANGVIENN
DARIAKNLWTDNGAGEKITYYRAQSDRDEAMYVISQIKKGIEDSDRNYKDFAILYRTNAQ
SRGMEEALVKANMPYTIVGGSKFYDRKEIRDVLAYFSLVTNPADNESFLRVVNEPKRGIG
LTSLEKFRAFAAQNNWTLLETAINASLVPGLTARAANQLMAFANMINNLRATMTDDLSIS
DLTKAILDKSDYEKTLKANPTPENQGRLENLAEFLSVTAQFDQNYQPSEDSVSKYVDFLG
ELALVSDLDSVDEHSNDQVTLMTLHAAKGLEFPVVFLVGMEETLFPLGSANNEEKLMEEE
RRLAYVGITRAKDKLYMTNAFSRLLYGKTLTNPQSRFINEIDGNLIMSPEPISMGFSGRS
GGNNDDYPFARRTQTATGTTFSGRSRVAQNQAARAAAPTISGKNTEVVAKTWRDGDQVSH
KKWGIGRVVKISGEGDNTELDIVFPNDGIKRLLASFAPITKVED
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgttattagacggaatgaacgagcgacaagcagaggcggttagtaccactgaa
gggccattgatgattatggcgggagccggatcaggtaagacacgtgttttgacacatcgt
gtggcacatttgattcaagatttagacgttatgccatggcgtattctagcgattacgttt
acgaataaagcagcccgtgaaatgaaagagcgtattgggacacttgtctcacaaaatgat
gcggatgctgtttgggtatcaacatttcacgcgttagccgtacgaattttacgtcgtgat
attgaccgcttagggtataagcgtgactttaccattgtggatgcaagtgcgcaaaagagt
ttggttaagcgtattttgaaggacatgaacgtcgatacagataagtatgatccacgtagt
gtgcaaggggccatttctaatgcgaagaatgcactattaacacccaagttgtacgctgaa
caagcatcaggaccatttgaagacatcgtcgcaaaggtctacaaggaataccaacaccaa
ttgagtttggcgcaatcagtcgactttgatgacttgattatgttgacgattgacttgtta
gaaaaagaacctgaagttttgaacttttaccaagaaaaattcttgtacgttcacgtcgac
gaataccaggacaccaacgatgcccaataccgtttggtaacattgttgtcaggattacac
cgtaatttggccgtagttggtgattcagaccagtcaatctatggttggcgtggtgctaac
atgcaaatcatgttggactttacgaaagactatccggatgctaagaccgttatgcttgaa
caaaattaccgttcaacgcaaacaatcttggacgcagccaatggcgtgattgaaaacaat
gatgcgcgtattgctaaaaacctatggactgataacggggcaggagaaaagattacctat
taccgtgcccaaagtgatcgtgatgaagcgatgtatgtcatcagccaaattaaaaagggt
attgaagatagtgatcgtaactacaaagacttcgcaatcttgtaccgtacaaacgcacaa
tcacgtggaatggaagaagcgttagtgaaagctaacatgccatacacgattgtgggtggt
tcaaagttttacgaccgtaaagaaatccgtgatgttttggcatacttctcattggtaacc
aatccagcggacaatgaaagcttcttgcgtgttgtaaatgaacctaagcgtggaattgga
ctaacaagtctagaaaagttccgtgcttttgcggcacaaaataactggacattgttggaa
actgcaattaacgcgagtcttgtaccaggtctaactgcacgtgcggcaaaccaattgatg
gcatttgcgaatatgattaataatctacgtgccacaatgactgacgacttgagtatttct
gacttaacaaaagccattttggataagtcagactacgaaaagacattaaaggcgaaccca
acaccagaaaaccaaggacgtttggaaaacttagccgaattcctatctgtaactgcacaa
tttgatcaaaattatcaaccaagcgaagacagtgtatctaagtatgttgatttcttaggt
gaattagcgttggtctcagatttggatagtgtggatgaacattcaaatgatcaagtaact
ttgatgacacttcacgcggcgaaggggctagaatttccagttgtgttcttagttggaatg
gaagaaacgctattcccactgggaagtgccaataacgaagaaaagttaatggaagaagaa
cgtcgtttagcgtacgtgggaattacacgtgctaaggacaagctgtacatgacaaatgcc
ttttcacgtttgttgtatggtaagacattaacgaatccacaatcacgtttcatcaatgaa
attgatggtaatctaattatgtcaccagagcctattagtatgggattctctggtcgtagt
ggcggaaacaatgacgattatccctttgcgcgtcgtacacaaacagcaaccgggacaaca
ttctctggtcgttcacgtgtggcccaaaaccaagccgctcgcgccgccgcaccaacaatt
agcggaaagaacactgaagtcgttgcgaaaacatggcgtgatggtgaccaagtttctcac
aagaagtggggaattgggcgtgttgttaagatttcaggtgaaggtgacaacactgaatta
gacatcgtctttccaaatgatggaatcaagcgtttgttggcatcatttgcaccaattact
aaggtagaagactaa
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