Wenyingzhuangia fucanilytica: AXE80_08335
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Entry
AXE80_08335 CDS
T04444
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
wfu
Wenyingzhuangia fucanilytica
Pathway
wfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AXE80_08335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wfu03019
]
AXE80_08335
03400 DNA repair and recombination proteins [BR:
wfu03400
]
AXE80_08335
Enzymes [BR:
wfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AXE80_08335
Messenger RNA biogenesis [BR:
wfu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AXE80_08335
DNA repair and recombination proteins [BR:
wfu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AXE80_08335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_40
HHH
Motif
Other DBs
NCBI-ProteinID:
ANW97475
UniProt:
A0A1B1Y9P7
LinkDB
All DBs
Position
complement(2086671..2088860)
Genome browser
AA seq
729 aa
AA seq
DB search
MDLYGPLKKYFGFNKFKGLQEGVVRSIAEGNDTFVIMPTGGGKSLCYQLPALMKEGTAIV
VSPLIALMKNQVDAIRGISEHQGVAHVLNSSLNKTEITRVKSDIENGITKLLYVAPESLT
KDEYVDFLKEQNISFFAIDEAHCISEWGHDFRPEYRNLRKIIERIGNVPIIGLTATATPK
VQEDIIKTLGMNNANTFKASFNRPNLFYEVKPKTKEVVTDIIRFIKQRSGKSGVIYCLSR
KKVEEIAQTLQVNGISALPYHAGLDAKTRAKHQDMFLMEDVDVIVATIAFGMGIDKPDVR
FVIHHDIPKSLESYYQETGRAGRDDGEGYCLAFYAYKDIEKLEKFMANKPVSEQELGHAL
LQEVVGYAETSISRRQYLLHYFGEEFDPVNGLGAKMDDNTKNPKKKTEATDCVVKLLKVV
KGSKEKYKAKDLVATLMGKANAMLISHKTNERDFFGIGKDKSNEYWTALIRQTLVAGYLR
KEIEQYGVVKITKEGLDFIKNPTSFMMTEDHIYVDENDKSIIIANAKNKAAMTTDEQLMG
LLKSLRKDVGKKKGIPPYAIFQDPSLEDMTLKYPTTIEELSNIHGVGDGKAKKFGAEFIA
LIAKYVEENNIDKPDDLVVKTTGEKSGLKLYIIQNTDRKLPLEDIARAKGIEMSELIKEI
ESIVYSGTKLNIDYYLEDILDEDQQEEIYDYFMEAESDDIKSALDEFDGDYDDEELRLMR
IKFISEVAN
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
attgatttgtacgggccgctaaaaaagtattttggcttcaacaaatttaagggtttacag
gaaggtgtagttaggagtattgcagaaggaaatgacacttttgtaattatgccaacaggg
ggaggaaaatcactttgttatcaactcccagcactaatgaaagaagggactgcaattgta
gtttcccctttaattgcattgatgaaaaatcaagtagatgctattagaggtatttcggaa
catcaaggagtagcacatgtgttaaactcttctttaaacaaaacagaaataactagggtt
aaatctgacatagaaaatggaattactaagcttttatatgtagctccagaatctttaact
aaagatgaatatgtagattttttaaaagaacaaaacatatctttttttgctattgatgaa
gctcactgtatctctgaatggggacatgattttagacctgagtacagaaatcttagaaaa
attattgaaagaattgggaatgtgcctattattggtttaaccgctacagccacccctaaa
gttcaagaagatattattaaaactttaggaatgaataatgccaatacttttaaggcatcg
tttaaccgtcctaatttgttttatgaagtaaagcctaaaaccaaagaagtagttacagat
atcatccgttttattaaacagagatcaggtaagtctggagttatttattgtttgagtaga
aaaaaggttgaagaaatagcacaaacattacaggtaaatggaatttctgcattgccttat
catgcaggtttagacgctaagactagagccaaacatcaagacatgtttttaatggaagat
gttgatgtaattgtggctaccattgcttttggaatggggatagacaagccagatgttcgt
tttgtaattcaccatgatattcctaaaagtttagaaagctattatcaagaaacaggtaga
gctggtcgtgatgatggtgagggatattgtttggctttttatgcctacaaagacatagaa
aaattagaaaaattcatggctaataaacccgtttcagaacaagaacttggtcatgcatta
ttacaagaagtagttggttatgccgaaacttcaataagtagaagacaatatttattacat
tattttggagaagagttcgatcctgtaaacggattaggtgccaaaatggatgataatacc
aaaaatcctaaaaagaaaaccgaagctaccgactgtgtagtaaaactattaaaagtagtt
aaaggttctaaggaaaaatataaagcaaaagatttagtggctaccctaatgggaaaagcc
aatgcaatgttaatatctcataaaaccaatgaaagagatttctttggaataggaaaagat
aagagcaatgagtattggacagctttaataagacaaactttagttgcaggttatttgcgt
aaagaaattgagcaatatggagtggttaaaattaccaaagaaggactagattttattaaa
aatcctacttcttttatgatgaccgaagaccatatttatgttgatgaaaatgataagtct
atcatcatagccaatgcaaagaacaaggctgctatgactaccgatgagcaattaatgggc
ttgttaaaatctttgcgaaaagatgttggaaagaaaaaaggaattcctccttatgctatt
tttcaagatccatcattagaggatatgacactaaaatatcctactaccatagaggagttg
tctaatatacatggagtaggtgatggtaaagctaaaaagtttggagctgagtttattgca
ttgattgctaaatacgttgaagaaaacaatattgataaacctgatgatttggtggtaaaa
actactggagaaaagtctgggttaaaattatatatcattcaaaacaccgaccgtaaatta
cctttagaggacattgctcgtgctaaaggaattgaaatgtctgaattgataaaagaaatt
gaatcaattgtttattctggaactaaattaaatattgactattatttagaagatatttta
gacgaggatcagcaagaggaaatatatgattactttatggaagcagaaagtgatgatatt
aaaagtgccctagatgagtttgatggtgattacgatgatgaagaattaagattaatgaga
attaagtttattagcgaagtggctaactag
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