KEGG   Wallemia ichthyophaga: J056_002350
Entry
J056_002350       CDS       T03457                                 
Name
(RefSeq) Histone deacetylase clr6
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
wic  Wallemia ichthyophaga
Pathway
wic03082  ATP-dependent chromatin remodeling
wic03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:wic00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    J056_002350
   03083 Polycomb repressive complex
    J056_002350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:wic03036]
    J056_002350
Enzymes [BR:wic01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     J056_002350
Chromosome and associated proteins [BR:wic03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     J056_002350
   HDAC complexes
    Sin3A-HDAC complex
     J056_002350
    BRAF-HDAC complex
     J056_002350
    REST complex
     J056_002350
    SHIP complex
     J056_002350
    MiDAC complex
     J056_002350
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     J056_002350
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    J056_002350
  Chromatin remodeling factors
   NuRD complex
    J056_002350
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 20375302
NCBI-ProteinID: XP_009269890
UniProt: R9AGP5
LinkDB
Position
Unknown
AA seq 513 aa
MADKERKLNSKVAYFYDPDVGNYSYGFGHPMKPHRMRMVHNLILNYNLDSKMSLLKPPRA
SPEEMTRFHTDEYIDFLHHVTPETATDLTRNHEIFLAGEDCPSFEGLFEFCSISAGGSIA
AANRLTSGESDIAVNWAGGLHHAKKREASGFCYVNDIVLSIIELLRYHQRVLYIDIDIHH
GDGVEEAFYTTDRVLTCSFHKYPDYFPGTGSTDDTGIHNGKNYSINFPLRDGIDDDSYQS
VFKPTIQRIMEYYRPGAVVLQCGADSLAGDKLGVFNLSMKGHAECVDFVKKFDLPMIVLG
GGGYAVRNVSRTWTYETGLLVDKQLEEDLPFNDYLDYYGPRYKLEVPETNMENHNTREYL
DDIQQKVFDHLNHLPFAPSVQMREVPSDPWTYSDHSDDELDEKISKAANQINQVYEEPEM
EEDDYQSAYKNRSNRLNGRNRTQNLQRQKRKFFQSAAISSAQQQFTHNDNGCGHSHLPKP
QLDDLLKLVVGSSAQKRPTPSRTHIYEQSPEYL
NT seq 1542 nt   +upstreamnt  +downstreamnt
atggcagataaagaaagaaaattgaattctaaagttgcttacttttacgatcccgacgtc
ggcaactactcttacggttttggtcacccaatgaaacctcataggatgagaatggtacat
aatctcatcttgaattacaatttagatagtaaaatgtctttattaaaacctccgcgcgca
tctcctgaagaaatgactcgattccacaccgacgagtacattgacttccttcatcatgtc
actccagagactgcaacagatttaactaggaatcatgaaatcttcctcgcaggtgaagat
tgcccttcttttgaaggtttgttcgaattttgctcgatttctgcaggcggtagcattgcc
gccgcaaatagactcacttccggtgaatctgacatcgctgtcaattgggcaggtggtctt
catcacgctaagaagagagaagcttcgggtttctgctacgttaatgatatcgtcctctct
atcattgaactccttcgctatcatcaacgcgttctctacattgacatcgatatccaccac
ggtgatggcgttgaagaagctttttatacaactgatcgcgtactcacttgctctttccac
aaataccctgactacttccctggcaccggatcaactgatgatactggtattcataacggt
aaaaattactccatcaacttccctctaagggacggcatagacgatgactcttatcagtcc
gttttcaaacccaccattcaacgtattatggaatattacagacctggtgctgttgtcttg
caatgtggtgctgattctttagctggcgataaattaggtgtcttcaatcttagtatgaaa
ggtcacgctgaatgtgtcgactttgttaagaagtttgaccttccaatgatagtactcggt
ggtggtggttatgctgttaggaatgtgagcaggacgtggacttacgaaactggtttgcta
gtagacaaacaattagaagaagatttgcccttcaacgattatctcgactattacggccca
cgttataaacttgaagttccagaaactaatatggagaaccacaatactcgggaatacctt
gacgacatacagcaaaaagttttcgatcatctcaatcaccttccctttgcaccatcagtc
cagatgcgtgaggtaccttcagatccatggacttacagtgatcattcggacgacgaatta
gatgaaaagatctccaaagccgctaatcagattaatcaggtgtatgaagagcctgaaatg
gaggaggatgactatcagtctgcttacaagaacagatcaaatagacttaatggccgtaat
cgtacacaaaacctacagcgacagaagagaaaattctttcagtctgccgctatatctagt
gctcaacagcagtttactcataatgataatggctgcggacattcacatctacccaaacct
caactagacgatttgctcaaattggtagtcggttcatcagcacagaagagaccgacgcct
tcacgaacacatatatacgaacaatctcccgagtatttgtaa

DBGET integrated database retrieval system