Wallemia ichthyophaga: J056_002350
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Entry
J056_002350 CDS
T03457
Name
(RefSeq) Histone deacetylase clr6
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
wic
Wallemia ichthyophaga
Pathway
wic03082
ATP-dependent chromatin remodeling
wic03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
J056_002350
03083 Polycomb repressive complex
J056_002350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
wic03036
]
J056_002350
Enzymes [BR:
wic01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
J056_002350
Chromosome and associated proteins [BR:
wic03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
J056_002350
HDAC complexes
Sin3A-HDAC complex
J056_002350
BRAF-HDAC complex
J056_002350
REST complex
J056_002350
SHIP complex
J056_002350
MiDAC complex
J056_002350
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
J056_002350
Heterochromatin formation proteins
Other heterochromatin formation proteins
J056_002350
Chromatin remodeling factors
NuRD complex
J056_002350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
20375302
NCBI-ProteinID:
XP_009269890
UniProt:
R9AGP5
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MADKERKLNSKVAYFYDPDVGNYSYGFGHPMKPHRMRMVHNLILNYNLDSKMSLLKPPRA
SPEEMTRFHTDEYIDFLHHVTPETATDLTRNHEIFLAGEDCPSFEGLFEFCSISAGGSIA
AANRLTSGESDIAVNWAGGLHHAKKREASGFCYVNDIVLSIIELLRYHQRVLYIDIDIHH
GDGVEEAFYTTDRVLTCSFHKYPDYFPGTGSTDDTGIHNGKNYSINFPLRDGIDDDSYQS
VFKPTIQRIMEYYRPGAVVLQCGADSLAGDKLGVFNLSMKGHAECVDFVKKFDLPMIVLG
GGGYAVRNVSRTWTYETGLLVDKQLEEDLPFNDYLDYYGPRYKLEVPETNMENHNTREYL
DDIQQKVFDHLNHLPFAPSVQMREVPSDPWTYSDHSDDELDEKISKAANQINQVYEEPEM
EEDDYQSAYKNRSNRLNGRNRTQNLQRQKRKFFQSAAISSAQQQFTHNDNGCGHSHLPKP
QLDDLLKLVVGSSAQKRPTPSRTHIYEQSPEYL
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaagaaagaaaattgaattctaaagttgcttacttttacgatcccgacgtc
ggcaactactcttacggttttggtcacccaatgaaacctcataggatgagaatggtacat
aatctcatcttgaattacaatttagatagtaaaatgtctttattaaaacctccgcgcgca
tctcctgaagaaatgactcgattccacaccgacgagtacattgacttccttcatcatgtc
actccagagactgcaacagatttaactaggaatcatgaaatcttcctcgcaggtgaagat
tgcccttcttttgaaggtttgttcgaattttgctcgatttctgcaggcggtagcattgcc
gccgcaaatagactcacttccggtgaatctgacatcgctgtcaattgggcaggtggtctt
catcacgctaagaagagagaagcttcgggtttctgctacgttaatgatatcgtcctctct
atcattgaactccttcgctatcatcaacgcgttctctacattgacatcgatatccaccac
ggtgatggcgttgaagaagctttttatacaactgatcgcgtactcacttgctctttccac
aaataccctgactacttccctggcaccggatcaactgatgatactggtattcataacggt
aaaaattactccatcaacttccctctaagggacggcatagacgatgactcttatcagtcc
gttttcaaacccaccattcaacgtattatggaatattacagacctggtgctgttgtcttg
caatgtggtgctgattctttagctggcgataaattaggtgtcttcaatcttagtatgaaa
ggtcacgctgaatgtgtcgactttgttaagaagtttgaccttccaatgatagtactcggt
ggtggtggttatgctgttaggaatgtgagcaggacgtggacttacgaaactggtttgcta
gtagacaaacaattagaagaagatttgcccttcaacgattatctcgactattacggccca
cgttataaacttgaagttccagaaactaatatggagaaccacaatactcgggaatacctt
gacgacatacagcaaaaagttttcgatcatctcaatcaccttccctttgcaccatcagtc
cagatgcgtgaggtaccttcagatccatggacttacagtgatcattcggacgacgaatta
gatgaaaagatctccaaagccgctaatcagattaatcaggtgtatgaagagcctgaaatg
gaggaggatgactatcagtctgcttacaagaacagatcaaatagacttaatggccgtaat
cgtacacaaaacctacagcgacagaagagaaaattctttcagtctgccgctatatctagt
gctcaacagcagtttactcataatgataatggctgcggacattcacatctacccaaacct
caactagacgatttgctcaaattggtagtcggttcatcagcacagaagagaccgacgcct
tcacgaacacatatatacgaacaatctcccgagtatttgtaa
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