Weissella koreensis: WKK_05660
Help
Entry
WKK_05660 CDS
T01577
Name
(GenBank) metallo-beta-lactamase superfamily hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
wko
Weissella koreensis
Pathway
wko03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WKK_05660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wko03019
]
WKK_05660
Messenger RNA biogenesis [BR:
wko03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
WKK_05660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
AEJ24002
LinkDB
All DBs
Position
1190775..1192655
Genome browser
AA seq
626 aa
AA seq
DB search
MSSNLTIMPFGGMRENGKNMYAITVGEDIFILDAGLQYPESDLLGVDVVIPDFKYLVEHA
DQIAGIFLTHGHADAIGALPYLLKQISAPIFGSELTIELAKLAINNDSEIKSFDDYHVVK
GSQEIDFGAVKISFFETTHTIPDSLGIVVGTPEGQIVYTGDFKFDTTAQGAYQSDLMRLA
EIGRKGVKALLIDAAGTGNIGQTAHESEIAKYIFETFRHHAGRIIVASAASNIQRIQQVI
NAAFQNQRKLVLSGNDIEKVVRTALNLGKLDLPIPENELFVSLKNMDSLKPEETVILETG
KMGEPVRHLQRMAHGDDRNIKIQTGDLVFITTTPSTAMEGYVARTRDMLFRAGADVKQIS
NDMKSSGHASKNDFQMMLNLMKPENILPVQGEYRLLNSGARAAKELNYSDDNIFILENGD
RLVLEENGKFELSGSIQVNATMIDGSGVGDIGSIVLNDRRILSEDGVFIAVITIDRKKKR
IVANAKIDSRGFVYVKTSRELMKEATELVETTVAAGIKNSKEFDWGNLKSSVRDALGKFL
YDQTHRKPVILPVIMEANQNGRRRRSPNKKGDEHQSSPKNSNQESSKKEVTNNKTENKPN
SNKKRPRHKRPNENNVKANDVNETKN
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaatttaacgattatgccgtttggtggaatgcgcgaaaacggtaaaaacatg
tatgcaattacagttggtgaagatattttcattctagatgctggtttgcagtaccctgag
agtgatcttttaggggttgatgttgtgattcctgattttaagtatctagtagaacatgca
gaccaaattgcaggaatattcttaacccatgggcatgcagacgctattggtgcattgcct
tatcttttgaaacaaatttcagcacctatttttggttcagagttaacaattgagcttgct
aaattggcaatcaataatgattctgaaatcaagagtttcgacgattatcatgtggtgaag
ggaagtcaagaaattgattttggagcagttaagatttctttctttgaaaccacgcatacc
attcccgattctttggggattgtcgttggtacgccagaaggacaaattgtctataccggt
gattttaagtttgataccacagcacaaggtgcttatcaaagtgatttaatgcgtttagct
gaaattggccgtaaaggggtaaaagctcttttgattgatgcagctgggactggtaatatt
gggcaaactgcgcatgaatcagaaattgctaagtatatttttgaaactttccggcaccat
gctggacggattattgtggcatcagctgcctcaaatattcaacgtatacaacaagtaatt
aacgctgcttttcaaaatcaacgaaaactggtattatcaggaaatgatattgaaaaggtt
gttcgaacagcacttaatctgggtaaattggacttaccaattcctgagaatgagttgttt
gtgtcgttaaaaaatatggattccttaaagccagaagaaactgtcattttggaaactggt
aagatgggagaacctgttcgacatcttcaacggatggcgcatggggatgatcgtaatatc
aagattcaaacaggagatcttgttttcataacaacgactccgtctactgcaatggaaggt
tatgttgcccgaactcgagacatgttgttccgagcaggagctgatgttaaacaaatttca
aatgatatgaaatcatctggacatgcttctaagaatgattttcaaatgatgttgaatttg
atgaaaccggaaaatattttaccggttcaaggggaatatcgtttattaaattcaggtgct
cgagcagccaaagaattgaattattctgatgacaatatctttattttggaaaatggggat
cgattggtcttagaagaaaatggtaaatttgaattgagcggctcaattcaagttaatgct
actatgattgacggatctggtgttggtgatattggatcaatcgtcttaaatgaccgacgt
attttgtcagaagatggtgttttcattgcagtgatcacgattgatcgtaagaaaaagaga
attgtggcaaatgctaaaatcgattcacgaggttttgtatatgttaaaacttcacgtgaa
ttgatgaaagaagcaacagaattagttgaaactactgtagctgcggggatcaaaaattct
aaagaatttgattggggtaatttaaagagctctgttcgtgatgccttaggtaagtttttg
tacgatcaaacacatcgtaagccagtgattttaccggttattatggaagctaatcaaaat
ggacgtcgacgccgaagccctaataaaaagggggatgaacatcaaagttcccctaagaat
agtaaccaagaatcatcgaaaaaagaagtaacaaataataaaactgaaaataagcctaat
agtaataaaaagcgtcctcgccataagcgaccaaacgaaaataatgtcaaagccaatgac
gttaatgaaactaaaaattaa
DBGET
integrated database retrieval system
