Weissella koreensis: WKK_06150
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Entry
WKK_06150 CDS
T01577
Definition
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
wko
Weissella koreensis
Pathway
wko03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
wko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WKK_06150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wko03400
]
WKK_06150
DNA repair and recombination proteins [BR:
wko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WKK_06150
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
WKK_06150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
AAA_30
AAA_19
DEAD
AAA
AAA_5
AAA_25
AAA_7
Kinesin
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AEJ24100
UniProt:
F8HYK6
LinkDB
All DBs
Position
1294835..1296850
Genome map
AA seq
671 aa
AA seq
DB search
MITRQADRKYEVVSKYQPTGDQPKAIDKLVKGLANGVKEQILLGATGTGKTFTISEVIAH
ANKPVLVLSHNKTLAGQLYGEFKEFFPNNAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSI
NDEIDKLRNSATSSLLSRNDTIVVASVSSIFGLGDPYQYRDHVISIRVGDELERNTLMRD
LIDIQFQRNDIDFQRGRFRARGDVVEIFPASSDAKALRIEFFGDEVDRIREIDSLTGEIV
ADLDTITIFPATHFMTNEKIRERALKTIQAELDEQLKNLEDSGKLLEAQRLKQRTEYDIE
MIREMGFTTGIENYSRHMDGRKPGEPPFTLIDFFPDDFLIVVDESHVTMPQIRGMYNGDR
ARKQTLVDFGFRLPSALDNRPLKLQEFEEHVNQVIYMSATPGDYENERVPESEVVQQIIR
PTGLLDPTVEVRPVNGQIDDLLGEINERAAKDERVFVTTLTKKMAEDLTDYLEDVGVKVK
YLHSDIKTLERTEIIRDLRLGKFDVLIGINLLREGIDVPEVSLVAILDADKEGFLRNTRS
LIQSMGRAARNENGHVIMYADHETGSMRSAIDETARRRQLQIEYNEEHGIVPHTIIKPVR
DLIAVSHDSDDTSNNEGSFTEVAFRDMARDDQEKMIKNLEEQMRAAAKRMDFEDAASLRD
SVMELKLQLGK
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgattacacgacaagcagatcgtaaatatgaagtagtatcgaagtatcaacccactgga
gatcaacccaaggcgattgataaattagttaaaggactcgccaacggtgttaaagaacaa
atcttattgggggcgacaggaacaggaaaaacattcacgatttctgaagtgattgcccat
gccaataagccagttttagtgctttcacataataaaactttggctggacaattgtatggt
gaattcaaagaattttttccaaataatgccgtagaatattttgtttcttattatgattat
tatcaaccagaagcttatgttccctcatcagatacctatattgaaaaagattcatccatt
aatgatgagattgataaattacgtaattcggctacttcgtcattgctttcacgaaatgat
accattgttgtggcttcggtttcatcaatttttggattaggagatccttatcaatatcgg
gaccatgtgatctcaattcgggtaggggatgaattagagcgaaatacattgatgcgtgac
ttgattgatatccaatttcaacgcaatgatattgatttccaacgtggacgttttcgggct
cgaggggatgtagtcgaaattttccctgcatcttctgatgcgaaagctttacgtattgaa
ttttttggagatgaagttgatcgaattcgggaaatagatagcttaaccggagaaattgtg
gctgatttagatacaatcaccattttccctgcaactcattttatgacgaatgagaaaatt
cgagaaagagccttgaaaactattcaagccgagttggacgagcaattaaaaaatctagaa
gactctggtaaattgttagaagcacagcgattaaagcaacggactgaatatgatattgaa
atgattcgagaaatgggctttaccacaggaattgaaaattattcaagacatatggatgga
agaaaacctggtgaaccaccatttactttaattgatttttttccagatgattttttaatt
gttgtagatgaatcgcacgttacgatgccccagattcgaggaatgtataatggtgacagg
gctcgtaagcaaacgttggttgattttggattccggctaccatcagctcttgataatcgt
ccattgaagttgcaagagtttgaagagcatgtcaatcaagtcatctatatgtcagcaaca
ccaggtgactatgaaaatgaacgagtaccagaatcagaggttgttcaacaaattattaga
ccaacagggttacttgatccaacagtggaagttcgtcctgtaaatggacaaattgatgat
ttattgggtgaaattaatgagcgcgcagctaaagatgaacgggtctttgtaacaacattg
actaagaagatggctgaagatttaactgattatttggaagatgtgggagtgaaagttaaa
tacttacattctgatattaagacgttagaacgtactgaaataattcgtgatttaagatta
ggtaagtttgatgtgttgattggaattaatttgttacgagagggtattgatgtccctgaa
gtttcattagtggcaattttagacgcagacaaagaagggtttcttagaaatacccgttcg
ttaattcaaagtatgggacgagctgcccgaaatgaaaatggacacgtaattatgtatgcg
gatcatgagactggttcaatgcgatcagcaattgatgaaacggcccgaaggcgtcaatta
caaattgaatataatgaggaacacgggatagttcctcatacgattattaaacccgttcgt
gatttgattgccgtatcacatgattcagatgatacttctaataatgagggatcattcaca
gaagtggcgttccgtgatatggctcgtgatgatcaggagaagatgattaaaaatttggaa
gagcaaatgcgagctgctgctaaacgcatggatttcgaagatgctgctagtttgcgtgat
tcagtaatggagttaaaattgcaacttggtaaatga
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