Wenzhouxiangella marina: WM2015_1620
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Entry
WM2015_1620 CDS
T04011
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
wma
Wenzhouxiangella marina
Pathway
wma03030
DNA replication
wma03430
Mismatch repair
wma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WM2015_1620
03430 Mismatch repair
WM2015_1620
03440 Homologous recombination
WM2015_1620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wma03032
]
WM2015_1620
03400 DNA repair and recombination proteins [BR:
wma03400
]
WM2015_1620
Enzymes [BR:
wma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WM2015_1620
DNA replication proteins [BR:
wma03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WM2015_1620
DNA repair and recombination proteins [BR:
wma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WM2015_1620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AKS41990
UniProt:
A0A0K0XWE2
LinkDB
All DBs
Position
1959482..1962982
Genome browser
AA seq
1166 aa
AA seq
DB search
MDRENSAAPPFIHLRLHTEYSLEDGTVRIGPLIDRAAELGMPAIAVTDWHNLFGLVKFYR
KAMDKGIKPIAGADLRVSDPEHPERFGVITLLIQDRTGYLNLCRLLSRSFLEGRFRGQPR
VHPAWLKGQTEGLITLLGRSSNLGQALSNGRRNLARSQLNEWLQLFPGRCYLALERLGRD
GEKLLENGLLDLAIQTETPVVASNDVRFLDQDDFFAHEARVCIHQSRLLDDKRRSRDYVD
QQYLKSSEAMAELFADLPVALHNTWELAQRCNLELTLGEYALPAFPVPDGETEADFLRRK
SREGLDQRLKRHGLAPDTTREDYDQRLERELEVIVSMGFPGYFLIVADFITWAFENGVPV
GPGRGSGAGSLVAWVLGITGLDPIRYELLFERFLNPERVSMPDFDIDFCVEGRDRVIDYV
AQRYGRDQVSQIITYGTMAAKAVVRDCGRVLGYNYGFVDSIAKLIPNKLEMTLDKALEEE
PELKQRYDNEEDTRSVLDLARSLEGLARNAGKHAGGLVIAPSALTDFTPLYTEPDGHSVL
TQYDKNDVESVGLVKFDFLGLRNLTIIDWALKAINESRKQKGQDELVLDDLPLDDDKAFK
LLQAAHTTAVFQLESPGMKELLRKLKPDSFNDIVAAVALYRPGPLDAGMVDEYINRKHGR
APVKYPHPLAEPILGDTYGVILYQEQVMQIAQELAGYSLGGADLLRRAMGKKKPEEMQRQ
RKIFVEGAAKNDIQADQAEPIFDLMETFARYGFNKSHSVAYALVAYHTAWLKAHYPAEFM
AAVLSADLDKTDKIANLIEDCRAMGLDILPPDINASVYRFKVENGAIRYGLGAIKGVGAG
AVENLVDVRERIGGFDSLSSFCREVDLGKLNRRTLETLIRAGALDQLNENRAALMAALPE
IVQEAERFQADREAGQASLFGSAPSAPSDPTPVPGRSVPDVRPWTGRQRLRAEREALGLY
LSGHPMDEVRDELAGFITTTLDQIGQRLGGERNGGEERRGRRQGVEMTLAGLIVAIRKRP
GKGAFVAIDDSTGRLEVAIFENLFDQVSNRLINDEIIVIRGKVEVDNFRGGFRMVAEEVL
EVDEARGRFAQRLEIEVDQAGDEFDRDLAAALHPYRSGQTPIILRYQNQDAHALLKLGES
WQVQPSSDLLAAIDGLEGIRSVRLRY
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcgagaactccgccgcaccgcccttcatccatcttcggctgcacaccgagtac
tcgctggaagacggcaccgtccgcatcggcccgctgatcgaccgagcggccgagctgggc
atgccggccatcgccgtcaccgattggcacaacctgttcggcctggtgaagttctatcgc
aaggcgatggacaagggcatcaagccgatcgccggggccgatctacgcgtatcggacccg
gaacacccggaacgcttcggcgtcatcaccctgctgatccaggatcgaacgggctacctc
aacctctgccgcctgctctcgcgcagcttcctggagggacgcttccggggccagccgcgg
gtccatcccgcctggctgaagggtcagaccgagggcctgatcaccctgctcggccgcagc
tccaatctaggccaggcgctctccaacgggcgccgaaatctcgccagaagccagctgaac
gaatggctgcagctgtttcccgggcgctgctacctggccctggaacggctcggccgggat
ggcgagaaactgctcgagaacggcctgctcgatctggccatccagaccgagacgccggtc
gtggccagcaacgacgtccgcttcctggaccaggacgatttcttcgcccacgaggcccgc
gtctgcatccaccagagccgcctcctcgacgacaagcggcgcagccgcgactacgtcgac
cagcagtatctgaaaagctccgaggccatggccgaactgttcgccgatctgcccgtggcc
ctgcacaacacatgggaactggcgcagcgctgcaatctggagctgaccctgggtgaatac
gccctgccggccttccccgtgcccgatggcgaaaccgaggccgacttcctgcgcaggaag
tcccgcgaaggtctggaccagcgtctgaagcgccacggactcgcgcccgacacgacgcga
gaggattatgaccagcgtctggagcgtgagctggaagtcatcgtctcgatgggcttcccc
ggttacttcctgatcgtcgccgacttcatcacctgggccttcgagaatggcgttccggtc
ggtccgggccgaggctccggtgcaggttccctcgtcgcctgggtgctcggcattaccgga
ttggatccaatacgttacgagctactcttcgagcgttttctgaatcctgagcgcgtctcg
atgcccgacttcgatatcgatttctgcgtcgagggacgcgatcgagtgatcgactacgtc
gcccagcgctacggccgcgatcaggtgtcccagatcatcacctacggcacgatggcggcc
aaggccgtggtgcgcgactgcgggcgcgtgctcggctacaactacggcttcgtcgactcg
atcgccaagctcatccccaacaagctggagatgaccctcgacaaggcgctggaagaagag
cccgagctcaagcaacgctacgacaacgaagaagacacgcgctcggtcctcgacctggct
cgctccctcgagggcctcgcccgcaacgcgggcaagcacgccggagggctggtcatcgcg
cccagcgccctgaccgacttcacgccgctctacaccgagcccgacggccattcggtgctg
acccagtacgacaagaacgacgtcgaatccgtgggcctggtcaagttcgacttcctcggg
cttcgcaacctgacgatcatcgactgggccctgaaggcgatcaacgagtcccgcaaacag
aagggtcaggacgagctggtcctcgatgacctgcccctcgacgacgacaaggccttcaag
ctgctccaggccgcccatacgaccgccgtcttccagctcgagtctccgggcatgaaggag
ctgctgcgcaagctcaaacccgacagcttcaacgacatcgtcgccgccgtggccctctac
cgtcccggcccactggatgcgggaatggtcgatgagtacatcaaccgcaagcacggccgc
gcgccggtcaagtacccgcaccccctggccgagccgatcctcggcgacacctacggcgtc
atcctctaccaggaacaggtgatgcagatcgcccaggagctggccggctacagcctcgga
ggtgccgacctgctgcgacgggccatgggcaagaagaagcccgaggagatgcagcgccag
cgcaagatcttcgtcgaaggtgccgcgaagaacgacatccaggccgaccaggccgaaccc
atcttcgatctgatggagaccttcgcgcgctacggcttcaacaagtcgcactcggtcgcc
tacgctctggtcgcctaccacacggcctggctcaaggcccactacccggccgaattcatg
gccgccgtgctgtccgccgatctcgacaagaccgacaagatcgccaacctgatcgaagac
tgccgggcgatggggctcgatatcctgccgccggacatcaatgcatcggtctatcgattc
aaggtcgagaacggcgcgattcgctatggcctgggagcgatcaagggggtcggcgccggc
gcggtcgagaatctggtcgatgtccgggagcggatcggcggcttcgattccctgtcgagc
ttctgccgggaagtcgatctcggcaaactcaatcgccgaaccctggagaccctgatccgg
gccggcgccctggaccagctgaacgagaaccgcgcggcgctgatggccgcgctgccggag
atcgtgcaggaggccgagcgcttccaggccgaccgggaggccggccaggccagtctgttc
ggctcagcaccatcggcacccagcgatccgacaccggtgcctggacgcagcgtgccggac
gttcgcccctggaccggacgccaacgactgcgggcggagcgcgaggccctgggcctgtac
ctgtccggccatccgatggatgaagtccgcgatgaactggccggtttcatcaccaccacc
ctcgaccagatcgggcagcgcctgggcggagagcgaaacggtggtgaagagcgtcgcggt
cgccgacagggcgtcgagatgaccctggccggtctgatcgtggcaatccgcaaacgtccg
ggcaagggcgccttcgtggccatcgacgacagcaccgggcgcctggaagtggcgatcttc
gagaacctcttcgatcaggtctccaatcgcctgatcaacgacgaaatcatcgtcattcgt
ggcaaggtcgaagtcgacaatttccgcggcggcttccggatggtggccgaggaagtgctc
gaagtcgatgaggctcgagggcgattcgcgcagcgtctggaaatcgaggtcgatcaggcc
ggcgatgaattcgatcgcgatcttgccgccgccctgcacccctaccgctcgggccagacc
ccgatcatcctgcgctatcagaaccaggacgcgcacgctctgctgaagctcggcgagagc
tggcaggtccagccctccagtgatctgctggccgcgatcgacgggctagagggcatccgc
agcgtgcggcttcgctactaa
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