Wenzhouxiangella marina: WM2015_514
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Entry
WM2015_514 CDS
T04011
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
wma
Wenzhouxiangella marina
Pathway
wma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
WM2015_514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wma03400
]
WM2015_514
Enzymes [BR:
wma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WM2015_514
DNA repair and recombination proteins [BR:
wma03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
WM2015_514
RecFOR pathway proteins
WM2015_514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
AAA_3
nSTAND3
Mg_chelatase
Rad17
AAA_22
AAA_18
TIP49
AAA_14
RNA_helicase
DUF815
AAA_25
NB-ARC
NTPase_1
AAA_28
IstB_IS21
Zeta_toxin
AAA_19
DUF87
AAA_17
Sigma54_activ_2
NACHT
AAA_24
TsaE
AAA_33
ABC_tran
Bac_DnaA
Motif
Other DBs
NCBI-ProteinID:
AKS40896
UniProt:
A0A0K0XTE8
LinkDB
All DBs
Position
604301..605359
Genome browser
AA seq
352 aa
AA seq
DB search
MDETRLISAANQPEEERIEASLRPARLDEYIGQPAMKERLSIYLESACKRHEALDHVLIF
GPPGLGKTTLAHVIAAEMGTQLRQTSGPVLERAGDLAALLTNLEPGDVLFVDEIHRLSPV
VEEVLYPAMEDYRIDIIIGEGPAARSIQLDLPRFTLVGATTRAGLLTSPLRDRFGIVERL
EFYDTADLASIVKRSAGILDIEAELEGAAEIARRARGTPRIANRLLRRVRDFAQVRADGR
ISARVAAEALELMQVDKRGFDTMDRRLLQVLVEHFNGGPVGVESLAASLSEERGTIEDVI
EPYLIQEGYLVRTARGRMATSRTWQHFGLTPPSATATEDLFAPTRSQSSDSD
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggatgagactcgtctgatctcggccgccaaccagcccgaggaagagcgcatcgaagcg
agcctgcgtccggcgcgcctcgatgaatacatcggccagccggcgatgaaggagcggctc
tcgatctacctcgagtcggcctgcaaacgccacgaggcgctcgaccacgtgctgatcttc
gggccgcccggcctgggcaagaccaccctggcgcacgtgatcgcggcggaaatgggtacc
cagctgcgccagacctcgggcccggtcctcgagcgcgccggcgacctggccgcgctgctg
accaatctggaaccgggcgatgtgctgttcgtcgatgagatccatcgcctgagccccgtg
gtcgaggaggtgctctacccggccatggaggattaccgcatcgacatcatcatcggtgag
gggccggcggcccggtcgatccagctcgatctgccgcgcttcaccctggtcggggcaacc
acccgggccggcctgctgacttcacccctgcgcgaccgtttcggtatcgtcgagcgtctg
gagttctatgacacggcagacctggccagcatcgtcaaacgctccgccggcatcctcgac
atcgaggccgagctcgagggcgcggccgagatcgcccggcgggcgcggggcacgccgcgc
atcgccaatcgtctcctgcgtcgcgtgcgtgacttcgcccaggtccgcgctgacggccgg
atcagcgcccgcgtggcggccgaggccctggagctgatgcaggtcgacaagcgcggtttc
gacacgatggaccggcgcctgctgcaggtgctggtcgaacacttcaatggcggcccggtg
ggcgtggagagcctggcggcctccctgtccgaggagcggggcacgatcgaggatgtcatc
gagccctacctgatccaggagggctatctggtccgaacggcgcgcggtcgcatggccacc
agtcggacctggcagcatttcggcctcacgccgccgagcgcgaccgccaccgaggacctg
ttcgctccgacccgaagccagtcctcggacagcgactga
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