Weissella paramesenteroides: CO680_04405
Help
Entry
CO680_04405 CDS
T05120
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
wpa
Weissella paramesenteroides
Pathway
wpa03030
DNA replication
wpa03430
Mismatch repair
wpa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CO680_04405
03430 Mismatch repair
CO680_04405
03440 Homologous recombination
CO680_04405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wpa03032
]
CO680_04405
03400 DNA repair and recombination proteins [BR:
wpa03400
]
CO680_04405
Enzymes [BR:
wpa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CO680_04405
DNA replication proteins [BR:
wpa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CO680_04405
DNA repair and recombination proteins [BR:
wpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CO680_04405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ATF41334
LinkDB
All DBs
Position
complement(861739..865107)
Genome browser
AA seq
1122 aa
AA seq
DB search
MVPLQTMTAFSLLRSPMTPQQLIKAVQDKGYQAVALTDYNVLYGMYDFYQAAQAADIQPI
LGLTAELIGLQSSQSYPVIFLVENQVGYHNLLQISSAINTQNEKMTLDDLKSYLSGLYII
LPSIGELAVLLGTEPERAMTLVKTVTALADATHVFLGVSLDMREAMLQSIKELAQNTGTR
IIANENVLYPNASDQFSAQVIQKLGQGEIISNVGLAQKQAATAYLKESTDWANEYNSRGL
SDAVENTDWIAAHSYVVLEQSSVTVPKYETPQGQSSSDYLAELATTGLTNRLHDMAVDAT
PYKARLKEELRIINELGFADYFLIVWDVLNYAHKKSIRTGPGRGSAAGSLVAYVLWITDV
DPIAYDLLFERFLNPERHQMPDIDIDIPDNRREEILDYLHEHYGHERVAQIITFSTMAQR
AVIRDVARVFGLNPTQIDNLSKSMPRGTASLQASYESSLPFRNALLDLPVDGQLLYQTAL
KLEGLPRNASLHAAGVVLSAEPLANYMPVQLGDDGRLVTQLPKGPVEALGLLKMDFLALS
NLNILDIAIREIQKIPDHESFSIASVSLDDQATLRLFQNGLTNGVFQFESGGMKNILRQL
RPDSFEDIVAANALFRPGPMQNIPHFVARKHQEEKQDVPDASMAEILAPTYGIIVYQEQV
MRVAERFAGFSLGEADLLRRAMSKKDHDKIAAMQSKFIDGAVGRHHDQQVAEQVFSYIET
FAQYGFNRSHAVAYSKLAFQLAYIKAHYPAAFYKAVLNDSIADHKKVGIYIAEAKLSHVT
ILRPSLNHSWQGYSMNKQGELQMGLASISGLRRDFREALIQERQEGGQYRDLTNFIGRLP
SKYRKVSQLEPLIYAGALDEFGFNRKTLLGSMQGYIDAVGLAGESISLFESLTPKMHEVA
EFPLNEKLGYEHEYLGVYLSGHPIEPYLAAIPENRRTDIANLAVGMTSVTVVIYVQNVKK
IRTKKGDPMAFVDGIDLTGTLSITIFPTVFKKIEPLLVNEKVLLITGKIEQQRGRDTLQM
IANQVINGDELLAESSVSEKAAASTGQWYLRIMASAEDAGIMPALQNILRQHHGANPVLI
VFERDHRKIALNETYWLTADDETGEAIRSILGENNVVFKSIQ
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggtaccacttcaaaccatgacagcatttagtttgttgcggagcccgatgactcctcag
caattgataaaggctgtacaagataagggttatcaggccgttgcgttgacggattacaac
gttttatacgggatgtatgatttttaccaagcagcccaggcagctgacatacagcccatt
ttaggattgacagctgaattgattggtttgcaatcttcacaatcttatccggtaattttt
ctggttgaaaatcaggttgggtatcacaacttattgcaaatcagtagtgccattaatacc
caaaatgagaaaatgacgctcgacgatttaaaatcgtatttatcaggtttatatattatc
ttacccagtatcggtgaactagcagttttgttaggaactgaacctgaacgagcaatgaca
ttggttaaaacagtcaccgcattagctgatgctactcatgtctttttgggagtttcgttg
gatatgcgtgaggctatgttgcaatcgatcaaagagcttgcacaaaatactggcacacgt
atcattgcgaatgaaaatgtcttatatcctaacgcatctgatcagttttcagcgcaagtt
attcagaaactaggccaaggtgagattatatctaatgttggtttggcacaaaagcaagcc
gcaacagcatatttgaaagaaagtaccgattgggcaaatgaatataatagccgcggttta
tcagatgctgtcgagaatacagattggattgcagcacatagttatgtggtgttagagcag
tcatcagtgaccgtgccaaaatatgaaacaccgcagggacaatcttcctcggattacctt
gcagagttagcgacaaccgggttgaccaatcgtttgcatgatatggctgttgatgctaca
ccgtataaagcacgtttaaaagaagaattacgtatcattaatgaactaggttttgccgat
tatttcttaattgtttgggatgttttgaattatgcgcacaaaaaatcaattcgaactggg
ccaggacgtggatcagcagctggctcgttagttgcctatgttttgtggatcacggatgtt
gaccctattgcttatgatttactttttgaacgttttttgaatccagaacgtcaccaaatg
ccggatatcgatattgacatccccgacaatcgccgtgaagaaattttggattatctacat
gagcattatgggcatgagcgagttgctcaaattattaccttttcaacgatggcccagcgc
gcagttattcgagatgttgccagagtttttggtttgaatccaacacaaatcgataattta
tcgaaatcaatgcctcgtgggactgccagtttacaagcttcatatgagtcgtctttgcca
tttcgtaatgcgttattagacttacctgttgatggacaactgttatatcagacagcattg
aagttagagggattgccacgcaatgcatcattacatgcagcaggggtcgtcttatccgcc
gaaccattggcaaattatatgccagttcaactaggggacgacgggcgtttagtcacacaa
ctccccaagggtcccgtagaagcattaggactgttaaaaatggactttttggctttatct
aacttaaacatcttagatattgctattcgtgaaattcaaaaaatacctgatcatgagtca
tttagtatcgcaagtgtatcattggatgatcaagcgacgttaaggctgtttcaaaatggt
ctgacgaatggtgtttttcaatttgaatcaggggggatgaaaaatattttgcgtcaatta
cgtcctgatagttttgaagatattgtggcagcaaatgctctcttcagaccaggacccatg
cagaatattcctcatttcgttgcccgtaagcatcaagaagaaaaacaagatgtaccagat
gcaagtatggctgaaattttagcgccgacatatggcattatcgtgtatcaagagcaagtt
atgcgagttgccgaacgctttgcaggtttttcattgggtgaggccgatttgttgcgtcga
gcaatgtcaaaaaaagaccatgataaaattgcggctatgcaatcaaaatttattgatggt
gcagttggccgacatcatgaccagcaagttgccgaacaggtattcagctatattgaaacg
ttcgctcaatatggttttaatcgatcacatgccgttgcttactcgaaactagctttccaa
ctggcatatattaaggcacattatccagccgctttttataaggcggtattaaatgattca
attgctgatcataaaaaagttggtatttacatcgccgaggcaaaattaagccatgtgact
attttgcgccctagtcttaatcattcgtggcagggatacagtatgaataaacaaggcgag
cttcaaatgggactagcatcaattagcggcttacgacgtgattttcgtgaagcgctgatt
caagaacggcaagaaggtggacaatatcgtgatttaacgaacttcattggtcgtctacct
agcaagtatcgcaaagtctcacagttagagccgttaatttatgcgggtgctttggatgaa
tttggatttaatcgtaaaacgttgttagggtcaatgcaggggtacattgatgcagttggg
ttggctggtgaatcgatttcattatttgagtcgctaacaccaaaaatgcatgaagttgct
gagtttccactcaatgaaaagttgggttatgaacatgaatatttaggtgtttatctaagt
ggtcatccaattgaaccttatttggctgcgataccagagaacagacggactgacattgct
aacttagcagtaggtatgacatcggtaacggtcgttatttatgtccaaaatgttaaaaaa
atccgtactaaaaaaggtgatccaatggcttttgtagacggtattgatttaactgggacc
ttatcgattactatttttccaacggttttcaaaaaaatcgagccattattggtaaatgaa
aaagtgctattaattactggaaaaattgaacaacaacgtggtcgtgatactttacagatg
attgcaaatcaagtaattaatggtgatgaattattggcagaatcatctgtttctgaaaaa
gcagcagcatcgactggacaatggtacttaagaattatggcatcagctgaagatgctggt
atcatgccagcattgcagaatattttgcgacaacaccatggtgctaatccggtattgatt
gtatttgaaagagatcatcgtaaaattgccttgaatgaaacgtattggttaaccgctgat
gatgaaaccggtgaggcaattcggtcaattttgggcgaaaacaatgtcgtattcaaatca
attcaataa
DBGET
integrated database retrieval system
