KEGG   Wallemia mellicola: WALSEDRAFT_59662Help
Entry
WALSEDRAFT_59662  CDS       T03142                                 

Definition
(RefSeq) ATP-dependent DNA ligase
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
wse  Wallemia mellicola
Pathway
wse03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:wse00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    WALSEDRAFT_59662
Enzymes [BR:wse01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     WALSEDRAFT_59662
DNA repair and recombination proteins [BR:wse03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     WALSEDRAFT_59662
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N BRCT_2 DNA_ligase_A_C RNA_ligase
Motif
Other DBs
NCBI-GeneID: 18473483
NCBI-ProteinID: XP_006956927
JGI: Walse1_59662
UniProt: I4YFY6
LinkDB All DBs
Position
Unknown
AA seq 1135 aa AA seqDB search
MKFNQLVSFFDNISTEKDTLKRSRKLEKLFDYHRKQFGNDFYNLLRLMIPERERERSMFG
IKEAVLAKIYVELLALSKDHKDGHRLLSWKAPTAGNFVSGDFASVLVDVMKNRVSYERKS
EFTIDEVNDKLDQLSRAKNFIQKKDIMKEFARNCDTTEQFWLVRILLKNLKISIRERSIL
SHFHRDAYSLFEVTTDLRTVAYKLYDPSIRLHDNDSSVQLFQVFQPMLCKRNVIPQIIKK
MPKSVPFVVEEKMDGERIQLHKKGTKYKYWSRNAKDYTYLYGENPKEGSFTPHIHHSFDD
RVDEIVLDGEMLAYSAAVDTILPFGTLKKAAKGDINIHPVFIVFDVLWVNGKDISKYPFK
ERQKVGKTVFNPISTRIEHVSRWEATQADELKQSLERIIISKGEGLVVKSPLSLYEYGGR
SDQWIKLKPDYFDEMSETADLLVIGGNWSASRNGTISTLYCALVDDRHETDEPDFLTFTR
VGTGYTAMDLELINQHFRKSETRKYTPASVYPGIEIGNETPDIIIDPKDSFVVEIKASDI
NRSVNYPCGYTYRFPRFKRLRLDKGNGRENPVDPDNMFKYSDMIAMRDGIQSSRRKQTED
KIREKKRAQPTKKKKQVISSRAVANVRAEKDNVRSNLFEGCAFRILNGTNDLEVSDLAVL
VSERKGMILSKIPNDEDCPEPLLVVAGKPTAVQVTQLMKTQKRSILSANWLLDCVKHNCI
IPLEGKDGESQWVFECATDRDTILNTLRPFFVTPEGRNLPGVSQGQIDEDAVGEINELKF
AEEPTLHSEADSAQDKDFDSDTATENERNESDNDIDIDDTIQEEAAEEMANTKADVSSPL
QQTQPEYKQTSTTRTATRRKANKTDEFDSSDESDDNKSIPTATQKQASPEHVKESQKIST
PSFIKQEVKEENVDENATSHNEKNLATSSPTTKRQLHETRVVSKDEKRRSHDNAFDSGSD
SDAHHEDGPVKKVKHEAEPHELKGQDAEVESIKHYEKSSQEQSQDLDNTHTSVPIEEVSI
EGSDKPENPLLNVVVYIDDYENAIENDLFPRPSITTEIDWSVVKDRITNLGGKIGELDDD
MLTHIVIDSRDKARVEELFDRTKQPRYRKLVSIDWVNSCYENKSFVDESLYKITL
NT seq 3408 nt NT seq  +upstreamnt  +downstreamnt
atgaaattcaaccaattggtatctttctttgataatatatctacagagaaggatactctt
aagcgtagtagaaagttagaaaagctattcgattatcatcgcaaacaatttggcaatgat
ttctacaatctactcagattaatgatacctgaacgcgaaagggagaggtctatgttcggt
ataaaagaagctgtcttagctaagatatacgtagaactactcgccctatctaaggatcat
aaagacggccataggttactcagttggaaggcacccactgctggtaacttcgttagcggt
gattttgccagtgttcttgttgacgtcatgaagaacagagtcagttatgagcgcaaatct
gaattcacgattgatgaagtcaatgataagcttgatcagctatccagggcgaagaacttc
atacaaaagaaagacattatgaaggaatttgcaagaaattgtgacacgactgaacagttc
tggctggtgagaattcttttaaagaatctcaaaataagcattcgagaacgctccatattg
tcgcattttcatcgtgacgcctatagcttgtttgaagtcacgactgatcttcgcaccgtg
gcttataaactatatgatccatccatcagattacatgataatgattcaagtgtgcagcta
tttcaggtcttccaaccaatgttatgcaagcgtaacgttattcctcaaatcataaagaag
atgcccaaaagtgtaccttttgtagtcgaggagaagatggatggtgaacgcattcagtta
cacaagaaaggtaccaaatacaagtattggagcaggaatgctaaagactacacatacttg
tatggtgaaaaccccaaagaaggctcttttacaccacatattcatcactcattcgacgat
cgtgttgacgagattgttctcgacggtgaaatgttggcatattcggcagcagtcgacacg
atactaccatttggtacactcaagaaagctgcaaaaggcgatattaatatacatccagtt
ttcatagtcttcgacgtactttgggtcaatggcaaagacatatctaaatacccctttaag
gagcgccaaaaggttggaaagaccgtatttaatccaatttctacaagaatagaacatgtc
tccagatgggaagccacccaagctgatgaattgaagcaatcactcgaacgtatcatcata
tcaaagggtgaagggctagtggttaaatcaccactatcattgtatgaatatggcggacgt
tcagaccaatggatcaagttaaaaccagactattttgatgaaatgtcagaaactgctgat
cttctcgttataggagggaactggtctgcgtccaggaatggtacgatatcaactctttat
tgcgcattggtcgatgatagacatgaaacagatgaaccagacttccttaccttcacccgt
gtcggtacgggatacactgcgatggatctggaactaattaatcagcattttcgcaaaagt
gaaacacggaaatatacccctgcatctgtataccctggtatcgagattggtaatgaaacg
ccagacattattattgaccctaaagattccttcgttgtcgaaatcaaagctagtgatatc
aaccgatctgtaaattatccttgtggatacacgtacagattccctcgctttaagcgtctc
agattagacaaaggcaatgggcgcgagaatccagttgatcctgacaatatgtttaagtat
agtgatatgatcgctatgagagatggcatacaatcgtcgcgtaggaagcaaacagaagat
aaaataagggaaaaaaagcgagctcagccgacaaagaagaaaaaacaggtcatcagttct
cgtgctgttgctaacgtgcgggccgaaaaagacaacgtacgaagcaacctgtttgaaggc
tgcgctttccgtattctcaatggcacaaatgatctcgaagtttcagatctcgccgtcctt
gtctcagaaaggaaaggtatgatattatcaaagatacccaatgatgaggattgcccggaa
ccactactggtagtcgctgggaaacctacagctgtacaggttacacagttaatgaagacc
caaaaacgctctattctatctgctaattggctacttgattgtgttaagcacaactgtatc
atacctttggaaggtaaagatggggaatcccaatgggtgttcgaatgtgcaactgataga
gatacaatattgaacactctccgacccttctttgtcacacctgaaggtagaaatcttccc
ggagtgtctcaaggtcaaatagatgaagacgccgttggcgaaattaacgagttgaaattc
gcggaagagcccacattacatagtgaggctgattccgcgcaagacaaggactttgattcc
gatactgccacagaaaatgagagaaacgaaagtgacaatgatattgatatagatgatacg
atacaggaagaagcggctgaagagatggcaaacactaaggcagatgtatcgtcacccttg
caacaaacacaaccagagtataaacagacgtctacaacacgtacagcgacgagacgcaaa
gctaacaaaacggacgaatttgattcgtctgatgagagtgatgataacaagtcaatacct
acggcaacccagaaacaagcctctcctgagcatgtgaaagaatctcaaaagataagtaca
cctagttttataaagcaagaagtcaaagaagagaatgtcgatgaaaatgccacatcacat
aatgaaaaaaatctagcaacctcaagtccaactacaaagcggcaattgcacgaaacgagg
gtggtctcgaaagatgaaaagaggcggagtcatgataatgcttttgacagtggttctgat
agtgatgcacatcatgaagacggacctgtcaagaaagtcaaacacgaagctgaaccacat
gaattgaaaggtcaggatgcagaggtcgagtctattaaacactacgaaaagtcatcgcaa
gagcagtcacaggatcttgataatacgcatacctctgttccaattgaagaagtatcaata
gagggtagcgacaaacctgagaaccctcttttgaatgttgttgtttacattgatgattac
gagaatgcgattgaaaatgatctatttccaaggccatccataacgactgagatagactgg
tcggtagttaaggaccggataacaaacctcggtggtaaaattggagaattagatgatgac
atgttgacgcatattgtgatcgactcaagagacaaggcccgagttgaggagttgttcgac
aggactaaacaaccaagataccggaaactagttagtattgattgggttaatagctgctac
gagaataagagctttgttgatgaatcattgtataaaataacgttgtga

DBGET integrated database retrieval system