Xanthomonas axonopodis Xac29-1: XAC29_03220
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Entry
XAC29_03220 CDS
T02500
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
xao
Xanthomonas axonopodis Xac29-1
Pathway
xao00300
Lysine biosynthesis
xao00470
D-Amino acid metabolism
xao01100
Metabolic pathways
xao01110
Biosynthesis of secondary metabolites
xao01120
Microbial metabolism in diverse environments
xao01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
xao00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XAC29_03220 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XAC29_03220 (dapF)
Enzymes [BR:
xao01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
XAC29_03220 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AGH76174
UniProt:
M4TQD8
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Position
750369..751223
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AA seq
284 aa
AA seq
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MSADGRSGRLRFTKMHGAGNDFVVLDLRDGTPPPDAALAAQLADRHFGIGCDQILTIEAP
RSEGAAAAYGIWNSDGSAARQCGNGARCVAAWLVRDGTAQGERFIIDSPATAHAVERLDG
DRYAVAMGVPQFEPTQIPLAGFAHARDEYALPVHGETVRFGAVSMGNPHAVVEVGRVDAA
PVERVGALLQQNAAFPDSVNVGFAQVVDPVHVRLRVFERGVGETLACGSGACAAAAVLMQ
RGRVERDVQVSLPGGELRIRWPGDQEQVVMSGPAVFVFDGEWNR
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgacggtcgcagcgggcgtctgcgtttcaccaaaatgcatggcgccggcaac
gatttcgtggtgctggacctgcgcgacggtacgccaccaccggatgccgcactggcagcg
cagttggccgaccgccacttcggaattggctgtgatcagatcctgaccatcgaggcgccg
cgcagcgaaggcgccgcggcagcctacggcatctggaattccgatggctcggccgcgcgc
caatgcggcaatggcgcacgttgtgtcgccgcgtggctggtgcgcgacggcaccgcccag
ggggagcgcttcatcatcgacagtccggcgaccgcgcacgcggtcgagcgcctcgacggc
gaccgctacgcggtggcgatgggcgtcccgcagttcgagcccacccagattccgctggcc
gggtttgcgcatgcacgcgacgaatatgcgctgccggtgcacggcgagaccgtgcgcttt
ggtgcggtgtcgatgggcaacccgcacgcggtggtcgaggtcggtcgcgtcgatgcagcg
ccggtggaacgcgtgggcgcgctgctgcagcaaaacgctgcgtttcccgattcggtcaat
gtgggtttcgcgcaggtggtcgaccccgtgcatgtgcgcctgcgcgtgttcgagcgcggc
gttggcgaaacgctggcctgcggaagtggcgcctgtgcggctgcggcggtgttgatgcag
cgcggccgtgtcgagcgcgatgtgcaggtgtccttgcccggtggcgagttacgcattcgt
tggcccggcgaccaggagcaggtggtgatgtccggcccggctgtgttcgtcttcgatgga
gagtggaaccgatga
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