Xanthomonas arboricola: XB05_20610
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Entry
XB05_20610 CDS
T06096
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
xar
Xanthomonas arboricola
Pathway
xar00300
Lysine biosynthesis
xar00470
D-Amino acid metabolism
xar01100
Metabolic pathways
xar01110
Biosynthesis of secondary metabolites
xar01120
Microbial metabolism in diverse environments
xar01230
Biosynthesis of amino acids
Module
xar_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xar00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XB05_20610
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XB05_20610
Enzymes [BR:
xar01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
XB05_20610
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AKC80863
UniProt:
A0A0E3YRZ3
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Position
complement(4917826..4918677)
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AA seq
283 aa
AA seq
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MSADGRSGRLRFTKMHGAGNDFVLLDLRDGTPPPDAALAARLADRHFGVGCDQILTIEPP
RSSEAVAAYGIWNSDGSAARQCGNGARCVAAWLVRDGTAQGDDFVIDSPFTSHRVQRLDA
GTYAVAMGVPQFEPTQIPLAGFAHAREEYALPVHGETVRFGAVSMGNPHAVVEVGRVEAA
PVERVGGLLQQNAAFPDSVNVGFVQVVDPTHVRLRVFERGVGETLACGSGACAAAVVLMQ
RGRVERDVQVSLPGGALRIRWAGEQQDVVMSGPAVFVFDGEWN
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgacggccgcagcgggcgtctgcgtttcaccaaaatgcatggcgccggcaac
gatttcgtgctgctggacctgcgcgacggcacgccgccaccggatgccgcgctggccgca
cgcctggccgaccgccatttcggggtgggctgcgaccagatcctgaccatcgaacccccg
cgcagcagcgaggcggtggccgcgtacggcatctggaattccgacggctcggccgcgcgc
caatgcggcaacggcgcgcgctgtgtggcggcctggctcgtgcgcgacggcaccgcgcag
ggcgatgacttcgtcatcgatagcccgttcacctcccatcgcgtgcagcgtctggacgcc
ggcacctatgcggtggcgatgggcgtgccgcaattcgagcccacgcagatcccgctggcc
ggctttgcgcatgcgcgcgaggaatacgcgctgccggtgcatggcgaaaccgtgcgcttt
ggcgcggtgtcgatgggcaacccgcatgccgtggtggaagtggggcgggtggaggcggcg
ccggtggaacgcgtcggcggcctgttgcagcagaacgccgcgttccccgattcggtcaac
gtcggctttgtgcaggtggtcgacccgacgcatgtgcgcctgcgcgtgttcgagcgcggc
gtcggcgaaaccctggcctgcggcagcggtgcctgcgcggcggcggtggtgctgatgcag
cgtggccgtgtcgagcgcgacgtgcaggtgtccttgcccggcggcgcgctgcgcatccgt
tgggccggcgaacaacaggacgtcgtgatgtcaggcccggccgtgttcgtcttcgatgga
gagtggaactga
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